Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq4511 84.2 2e-11 >seq4511 Length=1767931 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/147 (73%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 ||||||||| ||||||||||||| || || | |||||||| ||||||||||| Sbjct 464550 CTTCGTCTCGCGAGATAAGTTCGTTGCTGAAGGTGAGACCTGGCATGACTCCTCGTTTCT 464609 Query 16284 TTAACCAGAATATCGCAGC--AAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAA 16341 ||| ||| || || || || || || | | | ||||| ||||||||||| | ||||| Sbjct 464610 TTAGCCAAAAAATGGCTGCGAAACTGCCACTG--AAGAAGATACCCTCAACCGCCGCAAA 464667 Query 16342 AGCGATTAATCGTTCCGCGTACGTAGC 16368 |||| || ||||| | ||||||| Sbjct 464668 TGCGACTACACGTTCGGGAAACGTAGC 464694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511377092319520