Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq5098 122 6e-23 >seq5098 Length=3754408 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| || |||||||||| ||| ||||| || || |||||||| | || || || ||| Sbjct 2898778 TATTCAGCACCAAAATGCCGCCACTGGAAACCGTAGACAGGTCCTAAATCACCCTCCTCT 2898719 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 |||||| ||||||| ||| || | | || || |||||| ||||||||||| | Sbjct 2898718 CTATCAGTGAAACCACAGGAATCCAAGAAAGCCCGTGAACCATTTTCATCCCAAATGCGA 2898659 Query 97522 ACA-CCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTC 97580 | | || || | ||| |||||| | || |||||| ||||||||||||| | ||| Sbjct 2898658 ATACCCTTATCCGACAA-TTCTTTGGAATTTGTCGATCCTTTGATAAACCACAATAGTTC 2898600 Query 97581 TTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629 ||| || || ||| ||| || ||| |||||||| || | |||||| Sbjct 2898599 TTCAACCACTGCTCGCCAGAACACTTGTTTAGTTGTCAATAATGGAAAA 2898551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346759334554520