Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq5098 116 7e-21 >seq5098 Length=3754408 Score = 116 bits (128), Expect = 7e-21 Identities = 165/230 (72%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGT 35282 ||||| | | || || || || | |||||| ||| ||| || |||||||| | ||||| Sbjct 2898553 TTCCATTATTGACAACTAAACAAGTGTTCTGGCGAGCAGTGGTTGAAGAACTATTGTGGT 2898612 Query 35283 TCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACG 35342 | |||| || ||| | ||||||||||| | | ||| || | ||| ||| | | Sbjct 2898613 TTATCAAAGGATCGACAAATTCCAAAGAATTGTCGGATAAGGGTATTCGCATTTGGGATG 2898672 Query 35343 CTAATGGGTCGCGGGAATTTTTGGA---CAGTAGAGGGTTATAC-GATAGAGCAGAGGGA 35398 ||||| || |||| || ||||| | || |||| || ||||||| ||||| Sbjct 2898673 AAAATGGTTCACGGGCTTTCTTGGATTCCTGT----GGTTTCACTGATAGAGAGGAGGGT 2898728 Query 35399 GATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA 35448 ||||| ||||| || ||||| ||||| ||||| ||||||||||||||||| Sbjct 2898729 GATTTAGGACCTGTCTACGGTTTCCAGTGGCGGCATTTTGGTGCTGAATA 2898778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989510005093380