Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq5531 87.8 2e-12 >seq5531 Length=5527225 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 139324 AATATACCGTACACTAGAGTAAACCATACAAAATACATGGTTACTGATAAAGTTGCATAT 139383 || ||||| ||||| ||||||||||| | ||||||||||| |||||| || |||||| Sbjct 331067 AAAATACCCTACACGAGAGTAAACCACAATAAATACATGGTCACTGATGTAGCAGCATAT 331126 Query 139384 GTGGGTACGTCAAATTGGTTAGGTAATTATTTTAATGATAC 139424 || || ||| ||||||| ||| ||||||||| ||| || Sbjct 331127 GTCGGAACGAGTAATTGGTCGGGTGATTATTTTATTGACAC 331167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478553886947040