Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq5098 84.2 2e-11 >seq5098 Length=3754408 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 |||||||||||||| | ||| ||||||| | |||||| || || ||||| || ||| Sbjct 2899172 CCAGTAACATGAGCGATCATGTAAGTTAGCAAGGAATATGACGCTATATTAAACGGCACT 2899113 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 || |||||||||||| | || ||||| ||||| ||| | || |||| | || Sbjct 2899112 CCTAAACCCATGTCTGCGCTTCTTTGATAAAGCTGCGTGGACAATTCTCCGTTATTCACG 2899053 Query 20360 TAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTC 20419 |||||||| || ||| || ||||| | |||||| || | || | || ||| Sbjct 2899052 TAAAATTGTATGAAAGTGTGGCACGGCGGCAATGCCATCTTTGAAATATCAACTGGATTC 2898993 Query 20420 CACGCACACATAATGATTCTTCTATC 20445 || || |||| || || | ||| || Sbjct 2898992 CAGGCTGACATTATAATACGTCTGTC 2898967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441340601854240