Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq4511 87.8 2e-12 >seq4511 Length=1767931 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 37428 TTTTCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATA 37487 ||||||| ||| | |||||||| ||||| || ||| ||||| ||||| |||||| Sbjct 465799 TTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAGTACATCTCAGAATGAATA 465858 Query 37488 TTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTA 37547 ||||| || || || ||||| ||||| ||||| | ||||| | | || || || | Sbjct 465859 TTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGGAATTTTCACCTCTTGG 465918 Query 37548 AAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGA 37607 || |||| | | || |||||||| || ||||| ||| |||||||| || | Sbjct 465919 CTGAATCTCTCAATCAGATTCTCATTAACGATACCATCGGAAGCGGCAAAGAATGCTAAG 465978 Query 37608 ACATATTTTATAAAATGTCTTTCATC 37633 |||| ||||| ||| | ||||| Sbjct 465979 ACATGAGAGATAAAGTGTTTCTCATC 466004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592273590489440