Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5665 91.5 7e-14 >seq5665 Length=3828390 Score = 91.5 bits (100), Expect = 7e-14 Identities = 128/179 (72%), Gaps = 3/179 (2%) Strand=Plus/Plus Query 25010 ATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAA 25069 || ||||||||||||||||| || | || | ||| || || | ||||||| Sbjct 3267891 ATGATAAATTCTCCAGACAATACGCGCCTCACATATATATTGCTTGTATACGGTTCAATG 3267950 Query 25070 CATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGC 25129 |||| ||||| ||||| ||||| | || || || |||||||| ||||||||| ||| Sbjct 3267951 GATTCGTTATTCCCTAAAATTTGTGCCGTCGAGGCCGTTGGCATAGGTGCTATTAAAAGC 3268010 Query 25130 GAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC---TAAATT 25185 |||||||| | || | || |||||| || |||||||||||||| |||||| Sbjct 3268011 GAATTTCTTACTCCGTGCTTCGCAATCTTCGCCTTCAATTTATCCCAATCCCATAAATT 3268069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253022002213700