Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq5132 131 2e-25 >seq5132 Length=4754993 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || || |||||||| | ||||| || ||||| ||||| ||||| |||||||| |||||| Sbjct 1178027 ACTCCGATAGGACCCATACCAGGTCCGCCACCCCCATGAGGAATGCAGAATGTTTTATGT 1178086 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | || || ||||| |||| ||| | || || || ||| Sbjct 1178087 AGATTGAGATGTGACACGTCGCTGCCATAATCACCAGGTCGACACAAGCCAACTTGAGCA 1178146 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| ||||| || | |||||| ||||||||| || || || || || ||||| Sbjct 1178147 TTCATATTGGCACCGTCCAAATATACTTGACCACCAGCGTTGTGCACCATGTTGCATATA 1178206 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCAT 138412 | || || || ||||||||| |||| ||||||||||| || ||||| Sbjct 1178207 TCACTAATCGTTTCTTCAAATACTCCATTCGTCGATGGATACGTGATCAT 1178256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578956162066720