Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq5098 105 8e-18 >seq5098 Length=3754408 Score = 105 bits (116), Expect = 8e-18 Identities = 154/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 172399 AAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 172458 ||||||| || ||| |||| ||||| || || |||| ||| |||| |||| ||| Sbjct 2898598 AAGAACTATTGTGGTTTATCAAAGGATCGACAAATTCCAAAGAATTGTCGGATAAGGGTA 2898657 Query 172459 TTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAA 172518 || ||||| |||| |||||||| || | || || |||| || || || ||||| | Sbjct 2898658 TTCGCATTTGGGATGAAAATGGTTCACGGGCTTTCTTGGATTCCTGTGGTTTCACTGATA 2898717 Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578 || | || ||||||||||| || | || || || || ||| | ||| || ||| ||| Sbjct 2898718 GAGAGGAGGGTGATTTAGGACCTGTCTACGGTTTCCAGTGGCGGCATTTTGGTGCTGAAT 2898777 Query 172579 ATATCGACTGTG-ATACAGATTACACAGGACAAGG 172612 | | || | || | || ||||||||||||||||| Sbjct 2898778 ACAAAGA-TATGCACACGGATTACACAGGACAAGG 2898811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632443459883680