Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5738 96.9 5e-14 seq5216 96.9 5e-14 >seq5738 Length=4927432 Score = 96.9 bits (106), Expect = 5e-14 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || ||||| || || || ||||||||| | |||| || ||| | | Sbjct 161235 TGTACTTGGTAACTGCCTTTGTGCCTTCGCTAACGGCGTGCTTCGCCAACTCTCCGGGAA 161176 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || || || ||||| || | |||||| ||| ||||| | Sbjct 161175 GAAGAAGCCTCACAGCAGTTTGAATCTCCCGAGACGTGATCGTCGAGCGTTTGTTGTAGT 161116 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || ||||| | |||| || |||| | ||||||||||| |||| Sbjct 161115 GTGCCAGACGAGACGCCTCAGCTGCGATACGTTCGAAAACATCGTTGACAAAGCTATTCA 161056 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||| || ||| ||||| || ||||| |||||||||| Sbjct 161055 TGATGCTCATAGCCTTGCTGGAGATTCCGGTGTCAGGGTGGACTTGCTTCAGCACCTTGT 160996 Query 1485710 A 1485710 | Sbjct 160995 A 160995 >seq5216 Length=5828884 Score = 96.9 bits (106), Expect = 5e-14 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || || || || || || ||| |||||| | |||| ||| ||| ||| Sbjct 803808 TGTACTTGGTTACTGCTTTCGTGCCTTCGCTGACTGCGTGCTTCGCCAATTCACCGGGCA 803749 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || ||||||||||| || | | |||||| ||||||||| Sbjct 803748 ACAGAAGTCTCACAGCCGTCTGGATCTCCCGAGAGGTGATCGTCGAGCGCTTGTTGTAAT 803689 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| || | || || | | |||| | |||| | ||||||||||| ||||| Sbjct 803688 GCGCTAGTCTCGACGCTTCCGCGGCGATTCTCTCGAATACATCGTTGACAAAGCTGTTCA 803629 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| ||||||| || ||| || || || ||||| | || |||| Sbjct 803628 TGATGCTCATAGCTTTGCTGGAGATTCCGGTGTCCGGATGTACTTGCTTCAATACTTTGT 803569 Query 1485710 A 1485710 | Sbjct 803568 A 803568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915625598062004