Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq5098 102 1e-16 >seq5098 Length=3754408 Score = 102 bits (112), Expect = 1e-16 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 168523 TTAAAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 168582 || ||||||| || ||| |||| ||||| || || |||| ||| |||| |||| | Sbjct 2898595 TTGAAGAACTATTGTGGTTTATCAAAGGATCGACAAATTCCAAAGAATTGTCGGATAAGG 2898654 Query 168583 GTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCG 168642 || || ||||| | || |||||||| || | || || |||| |||||||| || | Sbjct 2898655 GTATTCGCATTTGGGATGAAAATGGTTCACGGGCTTTCTTGGATTCCTGTGGTTTCACTG 2898714 Query 168643 AAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTC 168702 | ||| | || ||||||||||| || | || || || || ||| | ||| || ||| Sbjct 2898715 ATAGAGAGGAGGGTGATTTAGGACCTGTCTACGGTTTCCAGTGGCGGCATTTTGGTGCTG 2898774 Query 168703 AATATATTGACTGTG-ATACAGATTACACCGGACAAGG 168739 |||| | || | || | || |||||||| |||||||| Sbjct 2898775 AATACAAAGA-TATGCACACGGATTACACAGGACAAGG 2898811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131263794080