Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4511 109 4e-19 >seq4511 Length=1767931 Score = 109 bits (120), Expect = 4e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 43829 GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAAT 43888 || ||||| ||||| ||| || || || || ||||| || ||| || || || ||| Sbjct 466001 GAGAAACACTTTATCTCTCATGTCTTAGCATTCTTTGCCGCTTCCGATGGTATCGTTAAT 465942 Query 43889 GAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTAT 43948 || ||| || || | || ||||| || || | || |||||||| ||||| ||| Sbjct 465941 GAGAATCTGATTGAGAGATTCAGCCAAGAGGTGAAAATTCCCGAAGCACGTTGTTTCTAT 465882 Query 43949 GGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACG 44008 || ||||||||||||||||||||||||||||| || |||||| | | || || || || Sbjct 465881 GGCTTTCAAATTGCCATAGAAAATATTCATTCTGAGATGTACTCTTTGCTCATTGAAACT 465822 Query 44009 TACAT 44013 || || Sbjct 465821 TATAT 465817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397427730445180