Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq5098 93.3 4e-14 >seq5098 Length=3754408 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 ||||| |||||| | || | |||| || ||||| || ||| | | |||||| Sbjct 2898961 CCTGAGGACAGACGTATTATAATGTCAGCCTGGAATCCAGTTGATATTTCAAAGATGGCA 2899020 Query 34583 CTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAG 34642 | || ||||||||||| || ||||| ||||| || || || ||||| ||| Sbjct 2899021 TTGCCGCCGTGCCACACTTTCATACAATTTTACGTGAATAACGGAGAATTGTCCACGCAG 2899080 Query 34643 CTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCT 34702 || |||||| || | ||||||||| ||||| |||||||| || || || || | Sbjct 2899081 CTTTATCAAAGAAGCGCAGACATGGGTTTAGGAGTGCCGTTTAATATAGCGTCATATTCC 2899140 Query 34703 CTGCTCACGTACATGATCGCTCATGT 34728 |||| || ||||||||||||||||| Sbjct 2899141 TTGCTAACTTACATGATCGCTCATGT 2899166 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 ||||||||||||||||| || |||| | || || || || |||||||| ||||| Sbjct 2899166 ACATGAGCGATCATGTAAGTTAGCAAGGAATATGACGCTATATTAAACGGCACTCCTAAA 2899107 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||||||| | || |||||| ||||| ||||| || || || ||||| ||| Sbjct 2899106 CCCATGTCTGCGCTTCTTTGATAAAGCTGCGTGGACAATTCTCCGTTATTCACGTAAAAT 2899047 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || || ||||||||||| || | |||||| | | ||| || ||||| || Sbjct 2899046 TGTATGAAAGTGTGGCACGGCGGCAATGCCATCTTTGAAATATCAACTGGATTCCAGGCT 2898987 Query 6797 CACATCACGATCCTTCTGTCATCAGG 6822 |||| | || | |||||| ||||| Sbjct 2898986 GACATTATAATACGTCTGTCCTCAGG 2898961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448229699257920