Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq4511 84.2 2e-11 >seq4511 Length=1767931 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 ||||||||| || || || | ||||| |||||||| ||||||||||| ||||| || Sbjct 465816 AATATAAGTTTCAATGAGCAAAGAGTACATCTCAGAATGAATATTTTCTATGGCAATTTG 465875 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936 ||| || || || || | ||||| | | || || || | | ||||| || | | Sbjct 465876 AAAGCCATAGAAACAACGTGCTTCGGGAATTTTCACCTCTTGGCTGAATCTCTCAATCAG 465935 Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT 4995 || || || || ||||| || || ||||| || || || |||||||| ||||||| Sbjct 465936 ATTCTCATTAACGATACCATCGGAAGCGGCAAAGAATGCTAAGACATGAGAGATAAAGT 465994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427019225563388