Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20septentrionalis_20[refseq_20GCF_5F001594115.1_202016- 03-25] 5,836 sequences; 291,747,019 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq5098 89.7 7e-13 >seq5098 Length=3754408 Score = 89.7 bits (98), Expect = 7e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 50308 TATTTACGACTaaaaaaaTGTTTTGGCGCGGAATAGCGGAAGAACTTTTATGGTTCCTCG 50367 |||| || |||||| || |||| ||||| | | | | |||||||| || ||||| || Sbjct 2898559 TATTGACAACTAAACAAGTGTTCTGGCGAGCAGTGGTTGAAGAACTATTGTGGTTTATCA 2898618 Query 50368 ACGGATCTACAAATTCTTTAAAGTTATCGGAGAAGTCCGTTCGTATATGGGACGCTCACG 50427 | ||||| |||||||| | | || ||||| ||| |||| || ||||| | | | Sbjct 2898619 AAGGATCGACAAATTCCAAAGAATTGTCGGATAAGGGTATTCGCATTTGGGATGAAAATG 2898678 Query 50428 GTTCCAGATCAAATTTAGATCGTTTAGGATTTAATTACAGAAACAAAGGAGATTTAGGAC 50487 |||| | | || ||| | || || | | | ||| | | || |||||||||| Sbjct 2898679 GTTCACGGGCTTTCTTGGATTCCTGTGGTTTCACTGATAGAGAGGAGGGTGATTTAGGAC 2898738 Query 50488 CTGTTTACGGTTTTCAATGGAGACATTTTGGAGC 50521 |||| |||||||| || ||| | |||||||| || Sbjct 2898739 CTGTCTACGGTTTCCAGTGGCGGCATTTTGGTGC 2898772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667026536864160