Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3174 107 1e-18 >seq3174 Length=2070283 Score = 107 bits (118), Expect = 1e-18 Identities = 182/259 (70%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||| |||||||| |||||| |||| | | |||||| || |||||||| |||||||| Sbjct 329114 AGTAACATGAGCGATCATGTAAGTCAGCAAAGAATACGACGCTATGTTAAACGGCACTCC 329055 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 ||| ||||| || || ||||||||| || || ||| | | ||| | | ||||| Sbjct 329054 TAAACCCATGTCTGCGCTTCTTTGATAAAGCTGCGTGGACAATTCTCCGTTATTTACATA 328995 Query 101872 AAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC--ATTC 101929 |||||| || |||||||| |||||||| |||| || | ||| || || | |||| Sbjct 328994 AAATTGTACAAAAACATGACACGGCGGCAATGCCATCTTTGAAATATC--AACCGGATTC 328937 Query 101930 CAAGCACACATTAACATCCTTCTATCTGTAGG-GTTTGTTTTTATAGTATCAATCAACTG 101988 || || |||||| || | ||| || ||| | || ||||| | | ||| | | Sbjct 328936 CAGGCTGACATTATAATACGTCTGTCCTCAGGAGAATG-CTTTATTTTGTGAATGACTTC 328878 Query 101989 TTTTAATTGGTCAACTCCT 102007 ||| |||||||| | |||| Sbjct 328877 TTTCAATTGGTCTATTCCT 328859 Score = 100 bits (110), Expect = 2e-16 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 102034 TTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTC 102093 ||| ||||| || || || | || ||||||||| || || |||||||| | ||| || || Sbjct 328719 TTTGTATTCAGCACCAAAGTACCGCCACTGAAAACCGTAGACAGGTCCCAAATCACCCTC 328660 Query 102094 ATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAAT 102153 ||||| ||| || ||| || || || | | || ||||| |||||||||| Sbjct 328659 CTCTCTATCAGTGAAGCCACAGGAATTCAAGAAAGCCCGTGAACCATTTTCATCCCAAAT 328600 Query 102154 GTGCACGCCAGCTGCT--GATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAAC 102211 ||| | || || | || | |||||| | || |||||| ||||||||||||| Sbjct 328599 GTGAATACC--CTTATTCGACAATTCTTTGGAATTTGTCGATCCTTTGATAAACCACAAT 328542 Query 102212 AGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 ||||||||||| || ||| ||| || ||| ||||| || | | |||||| Sbjct 328541 AGTTCTTCAACCACTGCTCGCCAGAACACTTGTTTAGTTGTCAGTAATGGAAA 328489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361230846091373