Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 125 6e-24
>seq3876
Length=890137
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || ||||| | |||| |||||| ||||| |||||||||||||| ||||| |
Sbjct 520606 CCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAA 520665
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | || || |||||||| || || | || | |||||||||||| ||
Sbjct 520666 AGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 520725
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| || ||| |||||| | | | || ||| | ||| |
Sbjct 520726 ATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACT 520785
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || |||||||| ||||| || |||||||| || ||||||||
Sbjct 520786 TCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| ||||||||| || ||||| ||||||||||| || | || || | ||||
Sbjct 520393 AGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCT 520452
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| |||||||| || || | || | |||||||||||| ||| | |||||||||||
Sbjct 520453 TCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCC 520512
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG-TTTCCACGGTAATGGT 21142
|| ||| |||||| | | | || || | ||| || ||||| || || ||
Sbjct 520513 TGAATTTTTGCTTTCACGTTCTCAATCGTGTC-CGACGCTTCGACTTCCAGAGTGATTGT 520571
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||| ||||| | |||||||||||| ||||||||
Sbjct 520572 CTTACCGGTGAGCGTTTTGACAAAAATTTGCAT 520604
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
||| |||| ||||| ||||| || ||||||||||| ||||| | || || || | ||
Sbjct 521076 GAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATC 521135
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
|| |||||||| || || | || | ||||||||| || || | ||||| |||||
Sbjct 521136 TTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTC 521195
Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142
|| ||| ||| || | ||| || ||| | ||| ||||| || |||||
Sbjct 521196 TTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGT 521255
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| ||||| || |||||||| || ||||||||
Sbjct 521256 TTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 93.3 bits (102), Expect = 4e-14
Identities = 149/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 20963 GAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTC 21022
||| |||| ||||| ||||| || ||||||||||| ||||| | || || || | ||
Sbjct 521304 GAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATC 521363
Query 21023 CTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082
|| |||||||| || || |||| | ||||||||| || || | ||||| |||||
Sbjct 521364 TTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTC 521423
Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142
|| ||| ||| || | ||| || ||| | ||| ||||| || |||||
Sbjct 521424 TTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGT 521483
Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| || || | ||||||||||| || ||||||
Sbjct 521484 TTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || ||||| | || | ||||| || || ||||| ||||||||||| || |
Sbjct 520150 CCGCCGCGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 520209
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || || |||| || |||||||| || ||| | || | |||||||| || ||
Sbjct 520210 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGG 520269
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| || || ||| || | ||| || || | ||| |
Sbjct 520270 ATTCCTTCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACT 520329
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|||| || |||||||| || ||||| || ||||| || |||||||||
Sbjct 520330 TCCAACGTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCATT 520377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422235408729068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |