Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 134 1e-26
seq3876 120 3e-22
seq4069 118 1e-21
seq3537 107 2e-18
>seq4552
Length=86203
Score = 134 bits (148), Expect = 1e-26
Identities = 164/219 (75%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| ||||| ||||| || |||||||||||| | || || |||||| |
Sbjct 3559 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTC 3618
Query 40749 CGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | | ||||| | || | || || | |||||||| ||||| || | ||||
Sbjct 3619 TGACACAATAGAAAACG-TAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACC 3677
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTA 40865
||||||| | |||| ||| || |||||| |||| |||| || ||| |||| |||||
Sbjct 3678 AGCAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCA--GACTA 3735
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||| || | || || ||||| || ||||
Sbjct 3736 TAACATCCAGAAAGAATCTACTCTTCATCTGGTTCTGCG 3774
Score = 134 bits (148), Expect = 1e-26
Identities = 164/219 (75%), Gaps = 6/219 (3%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| ||||| ||||| || ||||||||||| | || || |||||| |
Sbjct 3787 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 3846
Query 40749 CGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | | ||||| | || | ||||| | |||||||| ||||| || | ||||
Sbjct 3847 TGACACAATAGAAAACG-TAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCTGACC 3905
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTA 40865
||||||| | |||| ||| || |||||| |||| |||| || ||| |||| |||||
Sbjct 3906 AGCAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCA--GACTA 3963
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||| || | || || ||||| || ||||
Sbjct 3964 TAACATCCAGAAAGAATCTACTCTTCATCTGGTTCTGCG 4002
Score = 132 bits (146), Expect = 5e-26
Identities = 154/205 (75%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| ||||| ||||| ||||| || |||||||| ||| |||| |||||||| |
Sbjct 4015 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTC 4074
Query 40749 CGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | | | ||||| | |||| ||||| | ||||||||||| || || |||| |
Sbjct 4075 AGACACCATTGAAAACG-TAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATC 4133
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
| || || || |||| ||| || ||||| ||||| || | | || || ||||||||
Sbjct 4134 AACAGCGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACA 4193
Query 40868 ACATCCAGAAGGAGGCCACGCTGCA 40892
||||||| || || |||| || ||
Sbjct 4194 ACATCCAAAAAGAATCCACACTTCA 4218
Score = 109 bits (120), Expect = 6e-19
Identities = 156/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || || ||||| ||||| || ||||||||||| | || |||||||| |
Sbjct 4243 AATGCAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTC 4302
Query 40749 CGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| || ||||| | |||| ||||||| |||||||| || ||||| | || |
Sbjct 4303 AGACACTATTGAAAACG-TGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGATC 4361
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
| || || | |||| ||| ||||| || ||||| |||| | || || || ||||
Sbjct 4362 AACAGCGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACA 4421
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||| || || | || || || |||| || ||
Sbjct 4422 ACATCCAAAAAGAATCTACACTCCACTTAGTTTTACG 4458
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || |||||||| ||||| || |||||||||||| | || || ||||| |
Sbjct 3104 ATGCAAATCTTTGTAAAAACCCTCACTGGGAAAACCATCACCCTTGAGGTGGAAGCTTCT 3163
Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| |||| | || || | |||||||| || || || | || ||
Sbjct 3164 GACACTATAGAGAACG-TCAAAGCTAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCA 3222
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| | |||| || || || || || || || | | ||||| ||| |||||
Sbjct 3223 GCAACGTTTAATCTTTGCTGGAAAGCAACTAGAGGATGGCAGAACCCTTTCCGATTACAA 3282
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| | || || ||||| || ||||
Sbjct 3283 CATCCAGAAGGAATCTACACTTCATCTTGTTCTGCG 3318
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || ||||| |||||||||||| |||| |||||||| |
Sbjct 3332 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCA 3391
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| | || | ||||| | ||||||||||| || ||| |||| |||
Sbjct 3392 GACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCAG 3451
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | || |||||||| || || || | | || ||| || || ||
Sbjct 3452 CAGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAAT 3511
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|| || || || |||| || ||||| || ||||
Sbjct 3512 ATTCAAAAAGAATCCACACTTCATCTGGTTCTGCG 3546
>seq3876
Length=890137
Score = 120 bits (132), Expect = 3e-22
Identities = 151/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || ||||||||||| || || || ||||| | || |||||||| |
Sbjct 520604 ATGCAAATTTTTGTCAAAACGCTCACCGGTAAGACAATCACTCTGGAAGTCGAAGCGTCG 520545
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || |||| | || | |||||||| ||||| || || |||||| |||||||
Sbjct 520544 GACACGATTGAGAACG-TGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCCCCGGACCA 520486
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | |||| ||| || |||||||| || |||| ||||| || || || ||
Sbjct 520485 GCAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGACGGTCGCACACTTTCAGATTATAA 520426
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
||| |||||||| | || |||||
Sbjct 520425 CATTCAGAAGGAATCGACTTTGCAT 520401
Score = 116 bits (128), Expect = 4e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| ||||| | || || ||||||||||| | || ||||| || |
Sbjct 521288 ATGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521229
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| |||| | |||||||| |||||||| || ||||| | || |||
Sbjct 521228 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521169
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| || |||||||| || || | ||||| || |||||||||
Sbjct 521168 CAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521109
Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893
|| || || || |||| ||||||
Sbjct 521108 ATTCAAAAAGAATCCACACTGCAT 521085
Score = 109 bits (120), Expect = 6e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || || || ||||| || || || ||||||||||| | || ||||| || |
Sbjct 521517 AATGCAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATC 521458
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| |||| | |||||||| |||||||| || ||||| | || ||
Sbjct 521457 TGACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCA 521398
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | || | ||| || |||||||| || || | ||||| || ||||||||
Sbjct 521397 GCAGAGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAA 521338
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
||| || || || |||| ||||||
Sbjct 521337 CATTCAAAAAGAATCCACACTGCAT 521313
Score = 107 bits (118), Expect = 2e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| ||||| | || || || |||||||| | || || || || |
Sbjct 520832 ATGCAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACATTGGAAGTTGAGGCATCT 520773
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | || |||| | || | |||||||| ||||| || || ||||| |||||||
Sbjct 520772 GACACGATTGAGAACG-TGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCTCCGGACCA 520714
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| | | |||| ||| || |||||||| || || | || ||||| ||||||||
Sbjct 520713 GCAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGTACCCTTTCTGACTACAA 520654
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901
||| || ||||| |||| ||||| | || ||
Sbjct 520653 CATTCAAAAGGAATCCACATTGCATTTGGTTTT 520621
>seq4069
Length=1127261
Score = 118 bits (130), Expect = 1e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| |||||||| |||||||||||| |||| || || ||| ||
Sbjct 161548 ATGCAGATCTTCGTGAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTAGAGGCCTCC 161607
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||||| || || | ||||| ||||| || || | || ||
Sbjct 161608 GATACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCAGATCAA 161667
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| |||||||||| ||| |||||||| ||||| || | ||||| || ||| || ||
Sbjct 161668 CAGCGACTCATCTTCGCCGGCAAACAACTGGAGGATGGACGCACTCTGTCCGATTATAAT 161727
Query 40870 ATCCAGAA 40877
||||| ||
Sbjct 161728 ATCCAAAA 161735
>seq3537
Length=3457499
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103
|| || || ||||| |||||||| ||||||| |||||||| || ||||| ||||||
Sbjct 3065142 GTCGCATTTGCGGCAGTCGAGGGTATCTTCTTCAGTGGCAGTTTTGCAGCCATTTTTTGG 3065201
Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163
|| |||||||| || ||||||| || || || ||||||||||| |||||||| | |||
Sbjct 3065202 CTGAAGAAACGAGGAGTCATGCCAGGTCTCACCTTCAGCAACGAACTCATCTCGCGAGAC 3065261
Query 117164 GA 117165
||
Sbjct 3065262 GA 3065263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515189426770480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |