Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 141 8e-29
seq4552 122 8e-23
seq4069 116 3e-21
>seq3876
Length=890137
Score = 141 bits (156), Expect = 8e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || ||||| | | ||||| || | ||| || ||||||||||||||||| ||
Sbjct 521060 TACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAG 521119
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| ||| || ||||||||||| ||| |||| | | ||||||||| ||||
Sbjct 521120 AAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAG 521179
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || || || |||||| ||||||| ||| || | ||||| ||||| | ||| ||||
Sbjct 521180 GGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGC-CTCG 521238
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | || | ||||| ||||||| ||||| || ||||| |||||
Sbjct 521239 ACTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 141 bits (156), Expect = 8e-29
Identities = 171/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || ||||| | | ||||| || | ||| || ||||||||||||||||| ||
Sbjct 521288 TACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAG 521347
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||||| ||| || ||||||||||| ||| | || | | ||||||||| ||||
Sbjct 521348 AAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAG 521407
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || || || |||||| ||||||| ||| || | ||||| ||||| | ||| ||||
Sbjct 521408 GGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGC-CTCG 521466
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | || | ||||| || ||||| ||||| ||||| ||||||||
Sbjct 521467 ACTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
Score = 129 bits (142), Expect = 5e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | ||||| ||||| || | ||||| || || |||||||| |||||
Sbjct 519920 TACCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAG 519979
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || || || |||||||||||||| || |||| | | ||||||||||||||
Sbjct 519980 AAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAG 520039
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| || || ||| |||||| || || | ||||| ||||||| ||| |
Sbjct 520040 GAATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAA 520099
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| | || | ||||| || || ||||| || ||||||||||||||
Sbjct 520100 CCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 116 bits (128), Expect = 3e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||| | |||||||||||| ||||| || || ||| | ||| || |||||| |||||
Sbjct 519717 GTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGATAAAGTCCGTCCATCCTCTAGCTG 519776
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| | || || | || ||||||||||| ||||| || || || ||||||
Sbjct 519777 CTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTCTTTATCCTGAATTTT 519836
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||| || | ||||| ||||||| ||| ||||| | || | ||||| || ||
Sbjct 519837 CGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTTTTACCAGT 519896
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||||| || ||||||||||||||
Sbjct 519897 GAGAGTCTTGACAAAAATCTGCAT 519920
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || || ||||| | ||||| |||| || || || || ||||| |||||||||
Sbjct 521518 CCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGAT 521577
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || || || || ||||| ||||||||| |||| | ||||||||||||||| ||
Sbjct 521578 AAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGG 521637
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690
|| || ||||| ||| || ||| ||| || | |||| |||||| | ||| || ||
Sbjct 521638 ATACCTTCCTTATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCT-TCAAC 521696
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | || || ||||||| || || || |||||||||||
Sbjct 521697 TTCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | || || ||||| || | ||| || || |||||||||||||| ||
Sbjct 520604 TACCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAG 520663
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || || ||| || ||||||||||| ||| |||| | | |||||| || ||||
Sbjct 520664 AAAGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAG 520723
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || || |||||||| ||||||| ||| || | || | ||||| | ||| |||
Sbjct 520724 GGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGC-CTCA 520782
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | || | || || ||||||| ||||| || ||||| |||||
Sbjct 520783 ACTTCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || ||||| | | ||||| || | ||| || || || ||||| ||||| ||
Sbjct 520832 TACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAG 520891
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||||| ||| || |||||||||||||| |||| | | |||||||| ||||
Sbjct 520892 AAAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAG 520951
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || || || |||||| ||||||| ||| || | ||||| ||||| | ||| |||
Sbjct 520952 GGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGC-CTCA 521010
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | || | || || ||||||| ||||| || ||||| |||||
Sbjct 521011 ACTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 100 bits (110), Expect = 2e-16
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || ||||| | | ||||| || | || || || || |||||||| ||||| |
Sbjct 520378 CCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATC--TG 520435
Query 118572 ATAGTGCGCGTA--TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| |||| ||| || || ||||||||||| ||| |||| | | |||||| || || |
Sbjct 520436 AAAGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGG 520495
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688
| || || |||||||| ||||||| ||| || | || | ||||||| ||| |||
Sbjct 520496 GGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCCGACGCT-TCG 520554
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || | || | || || ||||| || ||||| |||||||| |||||
Sbjct 520555 ACTTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCAT 520604
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| ||||| | ||||| || || || | ||||| || || |||||||| |||||
Sbjct 520148 TACCGCCGCGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAG 520207
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || || || |||||||||||||| || |||| | | ||||||||| ||||
Sbjct 520208 AAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAG 520267
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||||||| |||||| ||| || | |||| ||||||| ||| |
Sbjct 520268 GGATTCCTTCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAA 520327
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | || || || || | || || || ||||| |||||
Sbjct 520328 CTTCCAACGTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376
>seq4552
Length=86203
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||||||||| | || || || ||||||| |||||| |||||||| |||||||||||
Sbjct 4471 ACCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGA 4412
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||| | || || || || || |||||| |||| | |||||| ||||| |||||
Sbjct 4411 AAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGG 4352
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGA 118689
|| || || ||||| |||||| || || | ||| | ||||| | ||| ||||
Sbjct 4351 GATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCT-TCGA 4293
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | ||||| || || |||||||| |||||||| |||||
Sbjct 4292 CTTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244
Score = 114 bits (126), Expect = 1e-20
Identities = 166/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | | || |||| || | ||| || ||||||||||| || |||||
Sbjct 3558 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 3499
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| | ||| || || ||||| ||||| | || |||||||||||||| || ||
Sbjct 3498 AGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 3439
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690
|| ||||| |||||| ||||| ||| || | ||| | ||||| | ||| |||||
Sbjct 3438 ATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCT-TCGAC 3380
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|||| ||| | ||||| || || ||||| || ||||| ||||||||| ||
Sbjct 3379 TTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATGCCT 3328
Score = 98.7 bits (108), Expect = 9e-16
Identities = 150/210 (71%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| || | |||||| || || || |||||||||||| | || | |||||| |
Sbjct 3311 CAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCTA 3252
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
| || |||||||| |||| | ||| |||||||| ||||| || || || |||||| |
Sbjct 3251 GTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTGGA 3192
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCACCGTTTTG 118709
| || ||| || | || | ||||| | ||| || ||||| | ||| | |||||
Sbjct 3191 TCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCT-TCCACCTCAAGGGTGATGGTTTTC 3133
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || ||||||||||| || ||||||
Sbjct 3132 CCAGTGAGGGTTTTTACAAAGATTTGCATG 3103
>seq4069
Length=1127261
Score = 116 bits (128), Expect = 3e-21
Identities = 146/200 (73%), Gaps = 3/200 (2%)
Strand=Plus/Minus
Query 118549 CTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGA 118608
||||||| || || |||||| || |||||| |||||| || ||||| || ||| |||
Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678
Query 118609 TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTT 118668
|||| ||||| ||||| || || || ||||||||||| || || || || | |
Sbjct 161677 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 161618
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
||| ||| || | | ||| ||||||| ||| | ||||| || || || ||||| || |
Sbjct 161617 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 161558
Query 118729 AAATCTGC---ATGGCTTAT 118745
| |||||| |||||||||
Sbjct 161557 AGATCTGCATGATGGCTTAT 161538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433805956775116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |