Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq4373 111 2e-19
seq4552 109 6e-19
seq3876 109 6e-19
seq4048 105 8e-18
seq3872 104 3e-17
seq3812 100 3e-16
seq4322 98.7 1e-15
seq4069 96.9 4e-15
seq3918 96.9 4e-15
seq3806 96.9 4e-15
>seq4373
Length=342615
Score = 111 bits (122), Expect = 2e-19
Identities = 73/81 (90%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
|||||| | |||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 241318 AAAAATATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 241377
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||||||||||
Sbjct 241378 TGACCACTATACTACCGAGGA 241398
>seq4552
Length=86203
Score = 109 bits (120), Expect = 6e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||| |||| ||| | |||| || ||||||||||| |||||||
Sbjct 3559 TCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGA 3500
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| | | || || || || || ||||| || || || |||||||| || | ||
Sbjct 3499 GAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGG 3440
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||| ||||| |||||| ||| | | | | ||||| | ||| ||
Sbjct 3439 AATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGAC 3380
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||| ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct 3379 TTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 84.2 bits (92), Expect = 3e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||| ||||| || | |||| || ||||| || ||||| || |
Sbjct 4243 TCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGA 4184
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| | | || || || || ||||| ||||| || || ||||| || || | ||
Sbjct 4183 AAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGG 4124
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | ||| |||||| |||||| || | | | | ||||| | ||| ||
Sbjct 4123 AATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGAC 4064
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|||| || |||||||| || || || || || || ||||||||||||
Sbjct 4063 TTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015
>seq3876
Length=890137
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
||| || | |||||| | ||||||||||| || ||||| ||||| || ||||| |
Sbjct 520377 TCCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGA 520436
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || || |||| || ||||| || || ||||| || | | ||||||||| | ||
Sbjct 520437 AAGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGG 520496
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134
| | ||||||||| ||| |||||| ||| | || | | |||||| || ||| |
Sbjct 520497 GATTCCTTCCTTGTCC-TGAATTTTTGCTTTCACGTTCTCAATCGTGTCCGACGCTTCGA 520555
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || | ||||| || || || || ||||| || ||||| ||||||||
Sbjct 520556 CTTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCAT 520604
Score = 109 bits (120), Expect = 6e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || | |||||| | |||||||||| |||| || |||||||| ||||| ||||
Sbjct 521290 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521349
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || ||||| || || ||||| || | || |||||| || | ||
Sbjct 521350 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGG 521409
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | || ||||| ||| |||||| ||||| | | | |||||| | || ||
Sbjct 521410 ATTCCTTCTTTGTCT-TGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGAC 521468
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| | |||||||||||| || || || || || |||||||| ||||||
Sbjct 521469 TTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517
Score = 98.7 bits (108), Expect = 1e-15
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 42972 AACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCA 43031
|| ||||||||||||||| ||||||||||| ||||| |||| || || || | ||
Sbjct 520621 AAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCT 520680
Query 43032 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091
|| ||||| || || ||||| || | | ||||||||| | || | | |||||||||
Sbjct 520681 TCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 520740
Query 43092 ATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
||| |||||| ||| | || | | |||||| | || || || | ||||||||
Sbjct 520741 -TGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGT 520799
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || | || || || || ||||||||
Sbjct 520800 CTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || | |||||| | |||||||||| |||| || |||||||| ||||| ||||
Sbjct 521062 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521121
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || | || || ||||| || || ||||| || | || |||||| || | ||
Sbjct 521122 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGG 521181
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | || ||||| ||| |||||| ||||| | | | |||||| | || ||
Sbjct 521182 ATTCCTTCTTTGTCT-TGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGAC 521240
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||||||| || || | || || || || ||||||||
Sbjct 521241 TTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 89.7 bits (98), Expect = 6e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| || | |||||| | |||||||||| |||| ||||| ||||||||||| ||||
Sbjct 520834 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAA 520893
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || ||||| || ||||| || || | || ||||| || | ||
Sbjct 520894 AGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGG 520953
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | || |||| | ||| |||||| ||||| | | | |||||| | || ||
Sbjct 520954 ATTCCTTCTTTGT-CTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAAC 521012
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | ||||||||| || || || | || || || || ||||||||
Sbjct 521013 TTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060
>seq4048
Length=968804
Score = 105 bits (116), Expect = 8e-18
Identities = 72/81 (89%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| ||||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 270424 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 270365
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||||||||||
Sbjct 270364 TGACCACTATACTACCGAGGA 270344
>seq3872
Length=347470
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 288595 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 288536
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 288535 TACTACCGAGGA 288524
>seq3812
Length=143806
Score = 100 bits (110), Expect = 3e-16
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122
||||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 40827 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 40768
Query 60123 CTATACTACCGAGGA 60137
|||||||| ||||||
Sbjct 40767 CTATACTATCGAGGA 40753
>seq4322
Length=1072510
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 201286 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 201227
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 201226 TATACTATCGAGGA 201213
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 201603 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 201544
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 201543 TATACTATCGAGGA 201530
>seq4069
Length=1127261
Score = 96.9 bits (106), Expect = 4e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 42996 TTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATG 43055
||||| ||||| ||||| | |||||| || | || || || || || || ||||| |||
Sbjct 161735 TTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATG 161676
Query 43056 AGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC 43115
|||||||| || || | ||| | | |||||||||| ||| || |||| || |
Sbjct 161675 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 161616
Query 43116 ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAG 43175
| || ||| | || || |||| ||||||||||| ||||| || || || || |||
Sbjct 161615 ATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGAAG 161556
Query 43176 ATTTGCAT 43183
|| |||||
Sbjct 161555 ATCTGCAT 161548
>seq3918
Length=5396348
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1569540 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 1569599
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 1569600 ATACTATCGAGGA 1569612
>seq3806
Length=329878
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| ||||| || | ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 198543 AAAAAAAATCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 198484
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||| ||||||
Sbjct 198483 TAACCACTATACTATCGAGGA 198463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571784556090440
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