Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 107 2e-18
seq4552 98.7 8e-16
seq4069 82.4 6e-11
>seq3876
Length=890137
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||| |||| || |||||||||||||| || || ||| |||| |||| ||
Sbjct 520396 ACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGAAAGTGTGCGACCGTCTTCA 520455
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| |||||||||||||| ||||||| ||| ||||| || || | || ||||||||| |
Sbjct 520456 AGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGGATTCCTTCCTTGTCCTGA 520515
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|||||| || || | | | ||||| | || || |||| || || |||||
Sbjct 520516 ATTTTTGCTTTCACGTTCTCAATCGTGTCCGACGCTTCGACTTCCAGAGTGATTGTCTTA 520575
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || || ||||| ||||||||
Sbjct 520576 CCGGTGAGCGTTTTGACAAAAATTTGCAT 520604
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45122 CTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCG 45181
||||| ||||| |||| ||| ||||| |||||||||||||| || || |
Sbjct 520618 CTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCA 520677
Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241
|| || || |||||||||||||| ||||||| ||| ||||| ||||| | || ||||||
Sbjct 520678 TCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTG 520737
Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301
||| ||||||| || || | | | |||| |||| || |||| || ||
Sbjct 520738 TCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATG 520797
Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || |||| || || || || ||||||||
Sbjct 520798 GTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45122 CTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCG 45181
|| || ||||| ||||| || |||||||||||||| || || || || ||
Sbjct 519934 CTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCG 519993
Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241
|| || || ||||||||||| || ||||||| ||| || |||||||| | || || ||
Sbjct 519994 TCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTA 520053
Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301
|| |||||| ||| || | | ||||| | |||| ||||||| || ||
Sbjct 520054 TCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATA 520113
Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || |||||||| ||||| || |||||
Sbjct 520114 GTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTT 45168
||||| | |||||| | ||||| || || ||| ||||||||||| ||||| || | |
Sbjct 521518 CCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGAT 521577
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| | || |||| || || || ||||| ||||| ||||| ||||| || ||||| ||
Sbjct 521578 AAGGT-ACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGG 521636
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| ||| ||||| || || ||| || || | | | | |||| | | || ||
Sbjct 521637 GATACCTTCCTTATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAAC 521696
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | ||| || ||||| || |||| |||||||| || || |||||
Sbjct 521697 TTCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 45122 CTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCG 45181
|| || || || ||||| || |||||||||||||| || || || || ||
Sbjct 520162 CTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCG 520221
Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241
|| || || ||||||||||| || ||||||| ||| || || ||||| | || ||||||
Sbjct 520222 TCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTG 520281
Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301
|| |||||| || || | | | ||||| |||| || |||| || ||
Sbjct 520282 TCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATG 520341
Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| || || | ||||| || || ||||||||
Sbjct 520342 GTCTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376
>seq4552
Length=86203
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || ||| || || || |||||||||||| || | | || |||
Sbjct 4224 ACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTCC 4165
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|||||||| |||||||| |||| |||||||| || || || | ||||| ||||||
Sbjct 4164 AGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGG 4105
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| ||| || | | | |||| | | || || || | |||||| || ||
Sbjct 4104 ATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGGGTAATGGTTTTA 4045
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || ||||| ||||| |||||||||||
Sbjct 4044 CCGGTGAGAGTTTTCACGAAGATTTGCAT 4016
>seq4069
Length=1127261
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 45149 TTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATC 45208
|| || || || || ||| ||| ||| | || ||||||||||| |||||||| ||
Sbjct 161735 TTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATG 161676
Query 45209 AACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCC 45268
| |||||||| || || || | |||||||||||| || || ||| || | |
Sbjct 161675 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 161616
Query 45269 ACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAG 45328
| | | || |||| ||||| | ||| || || || ||||| || || ||||| |||
Sbjct 161615 ATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGAAG 161556
Query 45329 ATTTGCATGTTGCCT 45343
|| |||||| || ||
Sbjct 161555 ATCTGCATGATGGCT 161541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395052940352083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |