Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq3537 104 2e-17 seq3798 96.9 3e-15 >seq3537 Length=3457499 Score = 104 bits (114), Expect = 2e-17 Identities = 158/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 14443 AAATAAATG-TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14501 ||||| || || ||| ||||| | | ||||| || || ||||| || || ||||| Sbjct 3064217 AAATATATTCTTACTTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAATACA 3064158 Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14561 | ||||| || || ||||| || || || ||||| ||||| ||||| | ||||| | Sbjct 3064157 TCTCAGAATGAATATTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGGAA 3064098 Query 14562 ATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14620 || ||||| ||| | || ||| || || |||||||||||| ||||||||| ||| Sbjct 3064097 TTTTCACCTCCTGACTGAA-TCTCTCAATCAGATTTTCATTAACGATACCATCAGAAGCG 3064039 Query 14621 GCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTC 14661 ||||| ||||| || | | |||||||||| ||| || Sbjct 3064038 GCAAAGAATGCTAAGACATGAGAGATAAAGTATTTCTCGTC 3063998 >seq3798 Length=619326 Score = 96.9 bits (106), Expect = 3e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 140209 AATATACCGTACACTAGAGTAAACCATACAAAATACATGGTTACTGATAAAGTTGCATAT 140268 || ||||||||| | ||||||||||| | ||||||||||| |||||| || |||||| Sbjct 199086 AAAATACCGTACGCGAGAGTAAACCACAATAAATACATGGTCACTGATGTAGCAGCATAT 199027 Query 140269 GTGGGCACGTCAAATTGGTCAGGTAATTATTTTACTGATAC 140309 || || ||| |||||||| ||| ||||||||| |||||| Sbjct 199026 GTCGGAACGAGTAATTGGTCGGGTGATTATTTTATTGATAC 198986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482317726453640