Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq3537 104 2e-17
seq3798 96.9 3e-15
>seq3537
Length=3457499
Score = 104 bits (114), Expect = 2e-17
Identities = 158/221 (71%), Gaps = 3/221 (1%)
Strand=Plus/Minus
Query 14443 AAATAAATG-TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14501
||||| || || ||| ||||| | | ||||| || || ||||| || || |||||
Sbjct 3064217 AAATATATTCTTACTTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAATACA 3064158
Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14561
| ||||| || || ||||| || || || ||||| ||||| ||||| | ||||| |
Sbjct 3064157 TCTCAGAATGAATATTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGGAA 3064098
Query 14562 ATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14620
|| ||||| ||| | || ||| || || |||||||||||| ||||||||| |||
Sbjct 3064097 TTTTCACCTCCTGACTGAA-TCTCTCAATCAGATTTTCATTAACGATACCATCAGAAGCG 3064039
Query 14621 GCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTC 14661
||||| ||||| || | | |||||||||| ||| ||
Sbjct 3064038 GCAAAGAATGCTAAGACATGAGAGATAAAGTATTTCTCGTC 3063998
>seq3798
Length=619326
Score = 96.9 bits (106), Expect = 3e-15
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 140209 AATATACCGTACACTAGAGTAAACCATACAAAATACATGGTTACTGATAAAGTTGCATAT 140268
|| ||||||||| | ||||||||||| | ||||||||||| |||||| || ||||||
Sbjct 199086 AAAATACCGTACGCGAGAGTAAACCACAATAAATACATGGTCACTGATGTAGCAGCATAT 199027
Query 140269 GTGGGCACGTCAAATTGGTCAGGTAATTATTTTACTGATAC 140309
|| || ||| |||||||| ||| ||||||||| ||||||
Sbjct 199026 GTCGGAACGAGTAATTGGTCGGGTGATTATTTTATTGATAC 198986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482317726453640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |