Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 111 1e-19
seq3876 111 1e-19
>seq4552
Length=86203
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | || |||| ||||||||| ||||||||||| |||||||||||||
Sbjct 4243 TCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGA 4184
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| ||| | | |||||||| |||||| || || |||| || | ||||||||| ||
Sbjct 4183 AAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGG 4124
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| || || || || |||| ||| || | | ||| ||||| | |||
Sbjct 4123 AATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGAC 4064
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | ||| ||| |||| ||||| | ||||| || || |||||||||
Sbjct 4063 TTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
||||| || |||| | || | ||| ||||| ||||||||||| |||||||| || |
Sbjct 4470 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAA 4411
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| ||| | | ||||||| ||| ||||| || |||| | | |||||||| ||
Sbjct 4410 AGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGG 4351
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| ||||| || || ||||| ||| || | | ||| |||||| | ||| |
Sbjct 4350 ATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACT 4291
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
|||| |||||| |||| || || | ||||| |||||||||||||||
Sbjct 4290 TCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCATT 4243
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
|||||| || || | || |||| |||||||| |||||||||||||| || || || |
Sbjct 3559 TCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGA 3500
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| ||| | | |||||| | ||||||||| ||| | || || | || |||||| |||
Sbjct 3499 GAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGG 3440
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| || || || || |||| | || || || | | ||| |||||| | |||
Sbjct 3439 AATTCCCTCTTTGTCTTGGATTT-TGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGA 3381
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | ||||||| |||| || || | || || ||||| || |||||
Sbjct 3380 CTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
>seq3876
Length=890137
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| || ||||| ||||||||||||||||||||||| | | || | ||||
Sbjct 521077 AGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 521136
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | ||||| || || |||| | ||| || ||||| || | ||||| || ||
Sbjct 521137 TCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCT 521196
Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
||||| |||| ||||| | | | | |||||| | |||| ||| | |||||| |
Sbjct 521197 TGAATTT-TTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGT 521255
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| |||||||||||||| || |||||||||||
Sbjct 521256 TTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 107 bits (118), Expect = 1e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| || ||||| ||||| || ||||| |||||||| | | ||| | ||||
Sbjct 520849 AGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCT 520908
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | ||||| || ||| |||| | |||||| |||||| || | ||||| || ||
Sbjct 520909 TCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCT 520968
Query 18234 GCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
||||| |||||| ||| | | | | |||||| | ||| ||| | |||||| |
Sbjct 520969 TGAATTT-TTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGT 521027
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| |||||||||||||| || |||||||||||
Sbjct 521028 CTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| || ||||| ||||||||||||||||||||||| | | || | ||||
Sbjct 521305 AGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 521364
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|| | ||||| || || | || | ||| || ||||| || | ||||| || ||
Sbjct 521365 TCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCT 521424
Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
||||| |||| ||||| | | | | |||||| | |||| ||| | |||||| |
Sbjct 521425 TGAATTT-TTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGT 521483
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| || |||| ||||| ||||| || ||||||
Sbjct 521484 TTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || || || | |||| || | ||| ||||| ||||||||||||||||| |
Sbjct 520606 CCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAA 520665
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || | |||||| | ||||| || || |||| | || || || ||| ||
Sbjct 520666 AGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 520725
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277
| |||||||| || ||||| |||| || || | ||| |||||| | |||
Sbjct 520726 ATTCCTTCCTTGTCCTGAATTT-TTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAAC 520784
Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | |||||| | || |||||||||||||| || |||||||||||
Sbjct 520785 TTCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 82.4 bits (90), Expect = 6e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
|||| |||||| | ||||||||| || ||||| ||||| || ||||||| | ||
Sbjct 519703 AGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGATAAAGTCCGT 519762
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| ||| || | || |||||||| | || |||||||||||||| || | ||||||
Sbjct 519763 CCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTCT 519822
Query 18228 TTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGT 18286
||||| ||||| | || || || | | | | ||||| | ||| || | ||
Sbjct 519823 TTATCCTGAATTT-TCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGT 519881
Query 18287 GATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| |||| || || | || || |||||||| |||||
Sbjct 519882 GATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379322626692135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |