Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 143 2e-29
seq3876 107 2e-18
seq4212 87.8 2e-12
>seq4552
Length=86203
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| || ||||| || || ||||| |||||| | || |||||| | ||
Sbjct 3560 ATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTCT 3619
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| || ||| | || ||||| |||||| | || || ||||||
Sbjct 3620 GACACAATAGAAAACGTAAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCTGACCAG 3679
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||| | || |||||||| ||||||||||||||| || ||| | || ||||||
Sbjct 3680 CAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAAC 3739
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || |||||||| |||||||||||||| ||
Sbjct 3740 ATCCAGAAAGAATCTACTCTTCATCTGGTTCT 3771
Score = 143 bits (158), Expect = 2e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| || ||||| || || ||||| ||||| | || |||||| | ||
Sbjct 3788 ATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTCT 3847
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| || ||| | ||| ||||| |||||| | || || ||||||
Sbjct 3848 GACACAATAGAAAACGTAAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAG 3907
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||| | || |||||||| ||||||||||||||| || ||| | || ||||||
Sbjct 3908 CAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACTATAAC 3967
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || |||||||| |||||||||||||| ||
Sbjct 3968 ATCCAGAAAGAATCTACTCTTCATCTGGTTCT 3999
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || |||||||| || || ||||| |||||| |||| || ||| | ||
Sbjct 3331 CATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTC 3390
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | | |||| || ||| | ||| ||||| || || | || || || ||
Sbjct 3391 AGACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCA 3450
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || || ||||||||||| | ||||| | ||| | ||||||||
Sbjct 3451 GCAGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAA 3510
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||||||||||| || ||||||||||| ||
Sbjct 3511 TATTCAAAAAGAATCCACACTTCATCTGGTTCT 3543
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || || ||||| ||||| ||||| ||||| | || || ||| | ||
Sbjct 4244 ATGCAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTCA 4303
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | |||| || || | ||| |||||| ||||| | || || || ||
Sbjct 4304 GACACTATTGAAAACGTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGATCAA 4363
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||| |||| ||||||||||| || |||||||| | ||| | ||||| |||
Sbjct 4364 CAGCGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACAAC 4423
Query 31373 ATTCAAAAAGAATCGACTCTTCA 31395
|| ||||||||||| || || ||
Sbjct 4424 ATCCAAAAAGAATCTACACTCCA 4446
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| || ||||| || || ||||| || ||| |||| || ||| | ||
Sbjct 4016 ATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTCA 4075
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | |||| || || | ||| |||||| || || | || || || ||
Sbjct 4076 GACACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATCAA 4135
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||| || ||||| ||||||| | ||| | ||| || |||
Sbjct 4136 CAGCGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAAC 4195
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| ||||||||||| || ||||| |||| ||
Sbjct 4196 ATCCAAAAAGAATCCACACTTCACTTGGTTCT 4227
>seq3876
Length=890137
Score = 107 bits (118), Expect = 2e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||||||||| || || || || || || || || ||||| | || || ||| ||||
Sbjct 520604 ATGCAAATTTTTGTCAAAACGCTCACCGGTAAGACAATCACTCTGGAAGTCGAAGCGTCG 520545
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || ||| | ||| |||||||||||| | || || ||||||
Sbjct 520544 GACACGATTGAGAACGTGAAAGCAAAAATTCAGGACAAGGAAGGAATCCCCCCGGACCAG 520485
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATTATA 31370
||| | | || ||||| || |||||| | |||||| || ||| | | |||||||
Sbjct 520484 CAGAGGTTGATCTTCGCCGGAAAACAGCTTGAAGACGGTCGCACACTTTCA--GATTATA 520427
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||||| || ||||||||| | ||| |||| |||
Sbjct 520426 ACATTCAGAAGGAATCGACTTTGCATTTGGTTCTT 520392
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || |||||||| || || ||||| ||||| | || ||||| | ||
Sbjct 520148 ATGCAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCG 520089
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||||| || || || ||| || || |||||| | || ||||| |||
Sbjct 520088 GACACGATCGAAAACGTGAAGGCGAAAATTCAAGATAAAGAAGGCATTCCTCCCGATCAG 520029
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || |||||| | |||||| || | |||||||||
Sbjct 520028 CAGAGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAAC 519969
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || ||||| || || ||| |||| | || || | |||||||
Sbjct 519968 ATTCAGAAGGAATCTACCCTGCATTTGGTTTTGAGGCTTCGCGGCGGTA 519920
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| | ||||| || || ||||| | || ||||| ||||
Sbjct 520376 ATGCAAATTTTCGTCAAGACATTAACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCG 520317
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | |||||| | ||| ||||||||||| | || || || |||
Sbjct 520316 GACACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAG 520257
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || |||||| | |||||| || | |||||||||
Sbjct 520256 CAGAGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAAC 520197
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || ||||| || || ||| | || | || || | |||||||
Sbjct 520196 ATTCAGAAGGAATCTACCCTGCATTTAGTTTTGAGGCTTCGCGGCGGTA 520148
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| || || |||| || ||||| ||||| | || || || | ||
Sbjct 521288 ATGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521229
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||||| |||||| | ||| ||||| ||||| | || || || |||
Sbjct 521228 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521169
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || ||||| || |||||| | ||||| ||| | || || |||
Sbjct 521168 CAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521109
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||||||||||| || || ||| |||| ||
Sbjct 521108 ATTCAAAAAGAATCCACACTGCATTTGGTTCT 521077
Score = 89.7 bits (98), Expect = 5e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || || || |||||||| ||||| ||||| | || || || | ||
Sbjct 521516 ATGCAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521457
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||||| |||||| | ||| ||||| ||||| | || || || |||
Sbjct 521456 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521397
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || ||||| || |||||| | ||||| ||| | || || |||
Sbjct 521396 CAGAGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521337
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||||||||||| || || ||| |||| ||
Sbjct 521336 ATTCAAAAAGAATCCACACTGCATTTGGTTCT 521305
>seq4212
Length=4365329
Score = 87.8 bits (96), Expect = 2e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 23768 GCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCC 23827
|| || ||||| |||| | |||| ||| || || || ||| | ||||||||
Sbjct 3414504 GCATGTGTAAAATATCGTTCGGACAAATAATTATATGTTTCTATGACTTTGTCAATGTCA 3414445
Query 23828 TCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACG 23887
| | | || ||||| || || || | ||||| ||| | |||||| |||||||| |
Sbjct 3414444 TTTTCATGAATACCAATAGCTACTCTCATCAACATATGTTGAGGCCTCTCGACTATCTTA 3414385
Query 23888 CCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTA 23947
||||| ||||| | ||| || | | | ||||||||| |||| ||| | ||| ||
Sbjct 3414384 CCGTTGATTTTTAGCAGGTAACTTCTCTCAAGCGTTTTAAAACCAATATAATTATAATTG 3414325
Query 23948 AAGTCACGATCGTGCACTATGGCCGAATTCA 23978
||||||||||||| | ||| || |||| ||
Sbjct 3414324 AAGTCACGATCGTATATTATAGCAGAATCCA 3414294
Score = 86.0 bits (94), Expect = 6e-12
Identities = 132/184 (72%), Gaps = 6/184 (3%)
Strand=Plus/Minus
Query 23005 AACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGAC-- 23062
||| ||| ||||||| ||||| || || | ||||||||| || || || | ||||
Sbjct 3415540 AACGAACATGTTGACAGCGATAGATGCTAAATTGCATACAGCGACTTCTCCA--GGACCA 3415483
Query 23063 GTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC-TG 23121
| ||| || | ||||||||| || | ||||| || || || ||||| | || ||| ||
Sbjct 3415482 GAGTATTCAATAATTTCGGTGCACAAGTTGCTGCATTTGATAGTGCCTATAT-GCTGATG 3415424
Query 23122 GTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTG 23181
|| |||||||||||| ||| ||||| ||||| || || || || || || || ||
Sbjct 3415423 ATTTGATTTTCGATTGCAATGATCTTTGTAAAGCATATAAGGTGTTCCAGTTTCTACTTG 3415364
Query 23182 CGAC 23185
|||
Sbjct 3415363 GGAC 3415360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445740640274160
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