Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq3783 95.1 2e-14
seq4212 93.3 5e-14
>seq3783
Length=2569584
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065
|| |||| | || ||||| |||||||||||||| ||||| || ||||| || ||||
Sbjct 868872 CATTAAAAACTTCCTTTGTCTCCTTGTGTAGATTGGATATAGCAATTCTAGCTGCTAAGG 868931
Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125
| |||||||| |||||||| | | ||| ||||| |||| ||||| ||| | || |
Sbjct 868932 TTGCATAATCTGGATGTTGATTGATCATAGTCGCTGCAGTTTCAGCTGCTAGATTATCTA 868991
Query 64126 ATTCTACCGTTGTTACTCCA 64145
|||| ||||||||||||
Sbjct 868992 ATTCGGTTGTTGTTACTCCA 869011
>seq4212
Length=4365329
Score = 93.3 bits (102), Expect = 5e-14
Identities = 181/265 (68%), Gaps = 2/265 (1%)
Strand=Plus/Minus
Query 63634 GAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63693
|||| | || ||||| || || | |||| | |||||||||| || || ||||| |
Sbjct 3414560 GAAATTACCTGGACATCTGCTGGTTATTAGTACAGGCATTAAATAGAGTCGGTGAAGCAT 3414501
Query 63694 GCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63752
| ||||| || ||| || || || ||| || || || || || ||| || || |
Sbjct 3414500 GTGTAAAATATCGTTCGGACAAATA-ATTATATGTTTCTATGACTTTGTCAATGTCATTT 3414442
Query 63753 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTG 63812
| |||||| || | || || | ||| ||||| || ||||| || || || || || |
Sbjct 3414441 TCATGAATACCAATAGCTACTCTCATCAACATATGTTGAGGCCTCTCGACTATCTTACCG 3414382
Query 63813 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63872
|| ||||| | || ||| | | || | ||||||||||||| ||| || || |||
Sbjct 3414381 TTGATTTTTAGCAGGTAACTTCTCTCAAGCGTTTTAAAACCAATATAATTATAATTGAAG 3414322
Query 63873 TCTCGTTCGTAAATAATAACCGAAT 63897
|| || ||||| || ||| | ||||
Sbjct 3414321 TCACGATCGTATATTATAGCAGAAT 3414297
Score = 82.4 bits (90), Expect = 1e-10
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 62325 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTA 62384
|||| || || ||| |||||| | ||| | ||||| ||| || | |||||| ||
Sbjct 3416298 TTCTGCATATCCGCATCCCATAAATCTCTGGAGATTAAATCTCGCAGTAAATGCGGATTG 3416239
Query 62385 ACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 62444
|| | |||||||| |||||||| | || || ||||| || ||||| |||||
Sbjct 3416238 ACAATGATAAATTCTCCCGACAATACACGCCTCACATAGATATTGCTTGTATATGGTTCA 3416179
Query 62445 ACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 62497
| || || ||||| || ||||| || || || || || || |||||||||||
Sbjct 3416178 ATAGATTCGTTATTCCCTAAAATCTGTGCTGTCGAGGCCGTTGGCATAGGTGC 3416126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629781204415440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |