Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 143 3e-29
seq3876 127 2e-24
>seq4552
Length=86203
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||||| ||| | |||| ||||| ||||| || |||||||| ||
Sbjct 3786 CCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAG 3727
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| || |||||| | |||||||||||| |||||| ||||||||| || |||||
Sbjct 3726 AGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 3667
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||||||||| ||| || ||||| | ||| | |||||| | || || ||
Sbjct 3666 ATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACT 3607
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| ||| | || || ||||| | ||||| ||||| ||||||||
Sbjct 3606 TCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||||| ||| | |||| ||||| ||||| || |||||||| ||
Sbjct 4014 CCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAG 3955
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| || |||||| | |||||||||||| |||||| ||||||||| || |||||
Sbjct 3954 AGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGA 3895
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||||||||| |||||| ||||| | ||| | |||||| | || || ||
Sbjct 3894 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACT 3835
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||| || | || || ||||| | ||||| ||||| ||||||||
Sbjct 3834 TCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| || || | ||||| ||| | |||| ||||| || || || ||||| ||||||
Sbjct 3331 GCCTCCACGAAGACGCAGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGA 3272
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
| || || || || || || || |||||| |||| | |||||||||||| |||||
Sbjct 3271 AAGGGTTCTGCCATCCTCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGG 3212
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||||||||| ||| || ||| | | || | ||||| | | |||||
Sbjct 3211 AATACCTTCTTTGTCTTGGATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCAC 3152
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| ||| | || || || || | |||||||| || ||||||||
Sbjct 3151 CTCAAGGGTGATGGTTTTCCCAGTGAGGGTTTTTACAAAGATTTGCAT 3104
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||||| ||| | |||| || || ||||||||||| ||||||||
Sbjct 3558 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 3499
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || ||||| || ||||| |||||| | |||||||| |||||||| || ||
Sbjct 3498 AGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 3439
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || |||||||| |||||| ||| | | ||| | ||||| | | || ||
Sbjct 3438 ATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGACT 3379
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | ||| | || || || || | || || || || || |||||
Sbjct 3378 TCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|| ||||||||||| | ||||| |||||||| ||||| ||||| | || || |
Sbjct 4458 CGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCG 4399
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| || || || ||||| |||| | ||| || ||||| ||||| || |||||||||
Sbjct 4398 TCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTG 4339
Query 139670 TCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| |||| | || | | ||| | ||||| | | || || |||| || |
Sbjct 4338 TC-CTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGAT 4280
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| || || || | ||||| || || ||||||||
Sbjct 4279 GGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244
>seq3876
Length=890137
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||||||| | ||| || || | || || || || ||||| || || ||
Sbjct 520834 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAA 520893
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| ||||| |||||||| |||||| |||||| | ||||||||| |||||
Sbjct 520894 AGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGG 520953
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||||||||| ||| |||||| ||| | | ||| | ||||| | | ||| ||
Sbjct 520954 ATTCCTTCTTTGTC-TTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAAC 521012
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| |||||||| ||||| ||||| |||||||||
Sbjct 521013 TTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 521061
Score = 118 bits (130), Expect = 1e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||||||| | ||| || || | || || |||||||||||||| || ||
Sbjct 521062 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521121
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| |||||||| || || |||||| | |||||||| |||||
Sbjct 521122 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGG 521181
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||||||||| ||| |||||| ||| | | ||| | ||||| | | ||| ||
Sbjct 521182 ATTCCTTCTTTGTC-TTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGAC 521240
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || || |||||||| ||||| ||||| |||||||||
Sbjct 521241 TTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 521289
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| || | | ||||||||| || | ||||| || || ||||||||||||||
Sbjct 520150 CCGCCGCGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 520209
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||||||||||||| || ||| |||||| | |||||||| |||||
Sbjct 520210 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGG 520269
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| |||| | ||| | | || | ||||| | | ||| ||
Sbjct 520270 ATTCCTTCCTTGTC-TTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAAC 520328
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | ||||| || || || || || ||||| ||||||||
Sbjct 520329 TTCCAACGTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376
Score = 104 bits (114), Expect = 2e-17
Identities = 164/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||||||| | ||| || || | || || || || ||||||||||||||
Sbjct 520378 CCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGAA 520437
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| |||||| |||||||| || || |||||| | ||||| || || ||
Sbjct 520438 AGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGG 520497
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTC-CACT-GTGTCGGTGGGCTCCA 139715
|| ||||| ||||| ||| |||||| ||| | |||| || | ||||| | | || |
Sbjct 520498 ATTCCTTCCTTGTC-CTGAATTTTTGCTTTCAC-GTTCTCAATCGTGTCCGACGCTTCGA 520555
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
| || | || | ||||| ||||| | |||||| || || |||||||||
Sbjct 520556 CTTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCATA 520605
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| || | | |||||| || || | ||||| || || ||||||||||||||
Sbjct 519922 CCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 519981
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||||||||||||| || ||| |||||| | ||||||||||||||
Sbjct 519982 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGA 520041
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||||||||| || ||| |||| | || | | ||| | ||||| | | ||| ||
Sbjct 520042 ATGCCTTCTTTATC-TTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAAC 520100
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||| | || | || || || || | || || || || || ||||||
Sbjct 520101 CTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCATA 520149
Score = 98.7 bits (108), Expect = 1e-15
Identities = 141/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || || ||||| || |||||| | || | |||||| ||||| || |||
Sbjct 521548 GTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCCGTCTTCAAGCTGCTTTCCA 521607
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| |||||| ||| ||||||||||| || || ||||| || || ||| ||| ||||
Sbjct 521608 GCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTTATCTTGGATCTTTGCTTTT 521667
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||| | | || || |||| ||| | ||||| |||||||| ||
Sbjct 521668 ACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAGGGTTATGGTCTTCCCGGTCAATGTC 521727
Query 139748 TTTACGAATATTTGCATAG 139766
|| ||||| || |||||||
Sbjct 521728 TTCACGAAAATCTGCATAG 521746
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/215 (71%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCT 139612
||||| || || | || || || ||||||||||| || || | || | |||
Sbjct 520621 AAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCT 520680
Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672
|| |||||||| || || |||||| | ||||| || ||||| || ||||| |||||
Sbjct 520681 TCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTC- 520739
Query 139673 GTGATTTTTTGTTTTAGCTGTTC-CACT-GTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730
||| |||||| ||| | |||| || | ||||| | | ||| || || | || | |
Sbjct 520740 CTGAATTTTTGCTTTCAC-GTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGG 520798
Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| |||||||| ||||| ||||| |||||||||
Sbjct 520799 TCTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 520833
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||||||| | ||| || || | || || |||||||||||||| || ||
Sbjct 521290 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521349
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| |||||||| || || | |||| | |||||||| |||||
Sbjct 521350 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGG 521409
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||||||||| ||| |||||| ||| | | ||| | ||||| | | ||| ||
Sbjct 521410 ATTCCTTCTTTGTC-TTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGAC 521468
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | || || || |||| ||||| || || || |||||
Sbjct 521469 TTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
Score = 89.7 bits (98), Expect = 5e-13
Identities = 165/237 (70%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 139531 GACATGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATA 139590
||||| ||||||| | || | || | ||||| ||||||||||| ||||| |||||
Sbjct 519687 GACATCTCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATA 519746
Query 139591 ATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGAT 139649
||| | || | || | || || ||||| || || || | ||||| | ||| ||||
Sbjct 519747 GTCGGATAAAGTCCGTCCA-TCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGAT 519805
Query 139650 CGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTG 139708
||||||| ||||||||||| || ||| |||| | ||| | | ||| | ||||| |
Sbjct 519806 CGGGAGGAATGCCTTCTTTATC-CTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAA 519864
Query 139709 GGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
| ||| ||||| | || | || || || || | || || || || || ||||||
Sbjct 519865 GCCTCAACCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCATA 519921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496035333701600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |