Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq4212 114 2e-20
seq3783 100 4e-16
>seq4212
Length=4365329
Score = 114 bits (126), Expect = 2e-20
Identities = 192/278 (69%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 78997 TTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTA 79056
|||| || || ||| |||||| | ||| | ||||| ||| || | |||||||||
Sbjct 3416298 TTCTGCATATCCGCATCCCATAAATCTCTGGAGATTAAATCTCGCAGTAAATGCGGATTG 3416239
Query 79057 ACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCC 79116
|| | ||||||||| |||||||| | || || ||||| || |||||||||||
Sbjct 3416238 ACAATGATAAATTCTCCCGACAATACACGCCTCACATAGATATTGCTTGTATATGGTTCA 3416179
Query 79117 ACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAAT 79176
| ||||| ||||| || ||||| || || || || ||||||||||||||||| | ||
Sbjct 3416178 ATAGATTCGTTATTCCCTAAAATCTGTGCTGTCGAGGCCGTTGGCATAGGTGCTATTAAA 3416119
Query 79177 AAACTATTTCTAAGACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGA 79236
| |||||| | |||| ||| || | || | ||||||||||| | |
Sbjct 3416118 AGGGAATTTCTTACTCCGTGCTTCGCGATCTTCGCCTTCAATTCATCCCAATCCCATAAA 3416059
Query 79237 TCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274
| | ||| ||| ||||| | ||||||||| || ||
Sbjct 3416058 TTTGTCGGCTTAACGTTCCACATATCATATTGGAGGAT 3416021
Score = 93.3 bits (102), Expect = 6e-14
Identities = 185/274 (68%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 80306 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 80365
|||| | || ||||| || || | |||| | |||||||||| || || ||||| |
Sbjct 3414560 GAAATTACCTGGACATCTGCTGGTTATTAGTACAGGCATTAAATAGAGTCGGTGAAGCAT 3414501
Query 80366 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 80425
| ||||| || ||| |||| ||| || || || || || || || || ||
Sbjct 3414500 GTGTAAAATATCGTTCGGACAAATAATTATATGTTTCTATGACTTTGTCAATGTCATTTT 3414441
Query 80426 GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTAT 80485
|||||| || | || || | ||| ||||| || ||||| || || || ||||| |
Sbjct 3414440 CATGAATACCAATAGCTACTCTCATCAACATATGTTGAGGCCTCTCGACTATCTTACCGT 3414381
Query 80486 TTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 80545
| ||||| | || |||| | | || | ||||||||||||| ||| || || ||||
Sbjct 3414380 TGATTTTTAGCAGGTAACTTCTCTCAAGCGTTTTAAAACCAATATAATTATAATTGAAGT 3414321
Query 80546 CTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 80579
| || ||||| || ||| | || | ||||| ||
Sbjct 3414320 CACGATCGTATATTATAGCAGAATCCAGTTTCTC 3414287
>seq3783
Length=2569584
Score = 100 bits (110), Expect = 4e-16
Identities = 106/140 (76%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 80678 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAA 80737
|| |||| | || ||||| |||||||||||||| |||| || ||||| || |||||
Sbjct 868872 CATTAAAAACTTCCTTTGTCTCCTTGTGTAGATTGGATATAGCAATTCTAGCTGCTAAGG 868931
Query 80738 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 80797
| ||||||||||||||||| | | ||| ||||| |||| ||||| ||| | || |
Sbjct 868932 TTGCATAATCTGGATGTTGATTGATCATAGTCGCTGCAGTTTCAGCTGCTAGATTATCTA 868991
Query 80798 ATTCTACCGTTGTTACTCCA 80817
|||| ||||||||||||
Sbjct 868992 ATTCGGTTGTTGTTACTCCA 869011
Score = 91.5 bits (100), Expect = 2e-13
Identities = 121/166 (73%), Gaps = 4/166 (2%)
Strand=Plus/Plus
Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCG--GCTAATTCACAACTCGCCTCTAATGCTCCGT 79357
|||| |||||||| |||| ||| | |||| ||| ||||| || |||| || || |
Sbjct 867107 TATGACTCATAAGGACCTT--TTTCAGTAGCTATTTCGCAACTAGCTTCTAGAGCGCCAT 867164
Query 79358 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGAT 79417
|||| | || || ||||| | ||||| || | |||||| ||| |||||||| |
Sbjct 867165 AATAGAGAGTCTCAAAAATTTGAACGTTGAGTTCATTAGCTTCTTTGCTTTCAAATGGGT 867224
Query 79418 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACC 79463
| | | | |||||| || |||||||||||||| |||||||||||
Sbjct 867225 ATCTCATTAAAATAAATGCATCTGCTAATCCTTGTACACCAATACC 867270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718227293041720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |