Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq3537 104 2e-17
seq3798 93.3 4e-14
>seq3537
Length=3457499
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 13908 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 13967
|| ||| ||||| | | ||||| || || ||||| || || |||||| ||||| ||
Sbjct 3064207 TTACTTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAATACATCTCAGAATG 3064148
Query 13968 TATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14027
|| |||||||| || || ||||| ||||| ||||| | ||||| | || |||||
Sbjct 3064147 AATATTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGGAATTTTCACCTC 3064088
Query 14028 C-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATG 14086
| || | || ||| || || ||||||||||| ||||||||| ||| ||||| ||||
Sbjct 3064087 CTGACTGAA-TCTCTCAATCAGATTTTCATTAACGATACCATCAGAAGCGGCAAAGAATG 3064029
Query 14087 CCAATATGTTTTTAATAAAGTATTGCTCTTC 14117
| || | | |||||||||| ||| ||
Sbjct 3064028 CTAAGACATGAGAGATAAAGTATTTCTCGTC 3063998
>seq3798
Length=619326
Score = 93.3 bits (102), Expect = 4e-14
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 139324 AATATACCGTACACTAGAGTAAACCATACAAAATACATGGTTACTGATAAAGTTGCATAT 139383
|| ||||||||| | ||||||||||| | ||||||||||| |||||| || ||||||
Sbjct 199086 AAAATACCGTACGCGAGAGTAAACCACAATAAATACATGGTCACTGATGTAGCAGCATAT 199027
Query 139384 GTGGGTACGTCAAATTGGTTAGGTAATTATTTTAATGATAC 139424
|| || ||| ||||||| ||| ||||||||| ||||||
Sbjct 199026 GTCGGAACGAGTAATTGGTCGGGTGATTATTTTATTGATAC 198986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478561143549720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |