Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3537 96.9 5e-15
seq3783 95.1 2e-14
seq4212 93.3 6e-14
>seq3537
Length=3457499
Score = 96.9 bits (106), Expect = 5e-15
Identities = 77/93 (83%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 42562 TACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATG 42621
||||||||||| |||||||| || ||| | || ||||||||||||| |||||||||| |
Sbjct 3063788 TACTTCTTCTATGGTCCAAAAAGAGGCTACGGCTTTTTTATACATATCCCAGATATCAGG 3063729
Query 42622 ATATTGAATTGGGAAAATAACAAATCTATTTGG 42654
||| ||||| || ||||| ||||| | |||||
Sbjct 3063728 ATACTGAATAGGAAAAATTACAAAACGGTTTGG 3063696
>seq3783
Length=2569584
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
|| |||| | || ||||| |||||||||||||| |||| || ||||| || ||||
Sbjct 868872 CATTAAAAACTTCCTTTGTCTCCTTGTGTAGATTGGATATAGCAATTCTAGCTGCTAAGG 868931
Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880
| ||||||||||||||||| | | ||| ||||| |||| ||||| ||| | || |
Sbjct 868932 TTGCATAATCTGGATGTTGATTGATCATAGTCGCTGCAGTTTCAGCTGCTAGATTATCTA 868991
Query 72881 ATTCTACCGTTGTTACTCCA 72900
|||| ||||||||||||
Sbjct 868992 ATTCGGTTGTTGTTACTCCA 869011
>seq4212
Length=4365329
Score = 93.3 bits (102), Expect = 6e-14
Identities = 185/274 (68%), Gaps = 0/274 (0%)
Strand=Plus/Minus
Query 72389 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 72448
|||| | || ||||| || || | |||| | |||||||||| || || ||||| |
Sbjct 3414560 GAAATTACCTGGACATCTGCTGGTTATTAGTACAGGCATTAAATAGAGTCGGTGAAGCAT 3414501
Query 72449 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 72508
| ||||| || ||| |||| ||| || || || || || || || || ||
Sbjct 3414500 GTGTAAAATATCGTTCGGACAAATAATTATATGTTTCTATGACTTTGTCAATGTCATTTT 3414441
Query 72509 GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTAT 72568
||| || || | || || | ||| |||||||| ||||| || || || ||||| |
Sbjct 3414440 CATGAATACCAATAGCTACTCTCATCAACATATGTTGAGGCCTCTCGACTATCTTACCGT 3414381
Query 72569 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 72628
| ||||| | || ||| | | || | ||||||||||||| ||| || || ||||
Sbjct 3414380 TGATTTTTAGCAGGTAACTTCTCTCAAGCGTTTTAAAACCAATATAATTATAATTGAAGT 3414321
Query 72629 CTCGTTCGTAAATAATAACCGAATTGAGTTTATC 72662
| || ||||| || ||| | |||| ||||| ||
Sbjct 3414320 CACGATCGTATATTATAGCAGAATCCAGTTTCTC 3414287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671100416543480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |