Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3537 96.9 5e-15 seq3783 95.1 2e-14 seq4212 93.3 6e-14 >seq3537 Length=3457499 Score = 96.9 bits (106), Expect = 5e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 42562 TACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATG 42621 ||||||||||| |||||||| || ||| | || ||||||||||||| |||||||||| | Sbjct 3063788 TACTTCTTCTATGGTCCAAAAAGAGGCTACGGCTTTTTTATACATATCCCAGATATCAGG 3063729 Query 42622 ATATTGAATTGGGAAAATAACAAATCTATTTGG 42654 ||| ||||| || ||||| ||||| | ||||| Sbjct 3063728 ATACTGAATAGGAAAAATTACAAAACGGTTTGG 3063696 >seq3783 Length=2569584 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820 || |||| | || ||||| |||||||||||||| |||| || ||||| || |||| Sbjct 868872 CATTAAAAACTTCCTTTGTCTCCTTGTGTAGATTGGATATAGCAATTCTAGCTGCTAAGG 868931 Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880 | ||||||||||||||||| | | ||| ||||| |||| ||||| ||| | || | Sbjct 868932 TTGCATAATCTGGATGTTGATTGATCATAGTCGCTGCAGTTTCAGCTGCTAGATTATCTA 868991 Query 72881 ATTCTACCGTTGTTACTCCA 72900 |||| |||||||||||| Sbjct 868992 ATTCGGTTGTTGTTACTCCA 869011 >seq4212 Length=4365329 Score = 93.3 bits (102), Expect = 6e-14 Identities = 185/274 (68%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 72389 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 72448 |||| | || ||||| || || | |||| | |||||||||| || || ||||| | Sbjct 3414560 GAAATTACCTGGACATCTGCTGGTTATTAGTACAGGCATTAAATAGAGTCGGTGAAGCAT 3414501 Query 72449 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 72508 | ||||| || ||| |||| ||| || || || || || || || || || Sbjct 3414500 GTGTAAAATATCGTTCGGACAAATAATTATATGTTTCTATGACTTTGTCAATGTCATTTT 3414441 Query 72509 GATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTAT 72568 ||| || || | || || | ||| |||||||| ||||| || || || ||||| | Sbjct 3414440 CATGAATACCAATAGCTACTCTCATCAACATATGTTGAGGCCTCTCGACTATCTTACCGT 3414381 Query 72569 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 72628 | ||||| | || ||| | | || | ||||||||||||| ||| || || |||| Sbjct 3414380 TGATTTTTAGCAGGTAACTTCTCTCAAGCGTTTTAAAACCAATATAATTATAATTGAAGT 3414321 Query 72629 CTCGTTCGTAAATAATAACCGAATTGAGTTTATC 72662 | || ||||| || ||| | |||| ||||| || Sbjct 3414320 CACGATCGTATATTATAGCAGAATCCAGTTTCTC 3414287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671100416543480