Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq4552 159 3e-34 seq3876 104 2e-17 seq4069 86.0 5e-12 >seq4552 Length=86203 Score = 159 bits (176), Expect = 3e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGC 15207 || ||||||||| || || || || |||||||| ||||||||||| ||| |||| | Sbjct 4459 TCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCC 4400 Query 15208 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTT 15267 |||||| | ||| ||||||||| | || ||||| ||||| || || ||||||||||| Sbjct 4399 GTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTT 4340 Query 15268 GTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 ||| ||||||| ||| || |||| || || || | ||| || || | || || Sbjct 4339 GTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGAT 4280 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||||||||||| |||||||| |||||||||||||| Sbjct 4279 GGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| || ||||| ||||| |||||||| |||||||| ||| ||| |||| | ||||| Sbjct 4225 AACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTC 4166 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | |||||| || ||| | |||| ||| ||||| || ||||||||| |||||||| Sbjct 4165 CAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTG 4106 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| |||||| |||| ||||| || | ||| || || | |||||||||||| Sbjct 4105 GATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGGGTAATGGTTTT 4046 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| || |||||||| || || |||||||| Sbjct 4045 ACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| ||||| |||||||| || || ||||| ||| |||| | ||||| Sbjct 3541 AACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGCCATCTTC 3482 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | |||||||||||| | |||| ||| || || || |||||||| |||||||| Sbjct 3481 AAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCTTG 3422 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 |||||| || ||| |||| || || || | ||| || || | ||| |||||||| Sbjct 3421 GATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGACTTCGAGGGTGATGGTTTT 3362 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| || ||||| || ||||| || ||||| Sbjct 3361 ACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332 Score = 122 bits (134), Expect = 6e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| || || ||||| || ||||| || || || | || ||||||| Sbjct 3769 AACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTCCTACCGTCTTC 3710 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || ||||| |||||| | ||||||||||| ||||| ||||| ||||||||||| Sbjct 3709 CAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTG 3650 Query 15274 AATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 || || ||| ||||| ||||||| || || ||| || || | ||| ||||||| Sbjct 3649 GATCTTAGCT-TTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGGGTGATGGTTT 3591 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| || |||||||| || || |||||||| Sbjct 3590 TACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560 Score = 122 bits (134), Expect = 6e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| || || ||||| || ||||| || || || | || ||||||| Sbjct 3997 AACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTCCTACCGTCTTC 3938 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || ||||| |||||| | ||||||||||| ||||| ||||| ||||||||||| Sbjct 3937 CAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTG 3878 Query 15274 AATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 ||||| ||| ||||| ||||||| || || ||| || || | || ||||||| Sbjct 3877 GATTTTAGCT-TTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGAGTGATGGTTT 3819 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| || |||||||| || || |||||||| Sbjct 3818 TACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||| || || || || || |||||||||||| || |||| | || || Sbjct 3313 AACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTC 3254 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || ||| || ||||| | || |||||||| || || ||||| ||||||||||| Sbjct 3253 TAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTG 3194 Query 15274 AATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 || || ||| || || | ||||| || || | ||| || || | ||| ||||||| Sbjct 3193 GATCTTAGCT-TTGACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTTT 3135 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | || || || ||||||||||| |||||||| Sbjct 3134 TCCCAGTGAGGGTTTTTACAAAGATTTGCAT 3104 >seq3876 Length=890137 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| ||||| || ||||| |||||||| |||||||| || ||| | | | ||||| Sbjct 521307 AACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTC 521366 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC-AC 15272 | ||||| || ||| | ||||| | || || || || |||||||||||||| Sbjct 521367 AAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTG 521426 Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 || ||||||| || ||| |||| || || || || || || || || ||||||| Sbjct 521427 AATTTTTGCT-TTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTT 521485 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 | |||||||| ||||| ||||| || ||||| Sbjct 521486 TTCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| ||||| || ||||| |||||||| |||||||| || ||| | | | ||||| Sbjct 521079 AACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTC 521138 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC-AC 15272 | ||||| || ||| | ||||| | || || || || |||||||||||||| Sbjct 521139 AAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTG 521198 Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 || ||||||| || ||| |||| || || || || || || || || ||||||| Sbjct 521199 AATTTTTGCT-TTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTT 521257 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || |||| ||||| || |||||||||||| Sbjct 521258 TTCCGGTCAATGTTTTGACGAAAATTTGCATA 521289 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208 |||||||| ||||| | ||||| || ||||| |||||||| || || | | | Sbjct 520618 CTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCA 520677 Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||| | ||||| || ||| | ||||| | || ||||| || |||||||| ||| Sbjct 520678 TCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTG 520737 Query 15269 TCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327 || |||||| ||| || || | || || || || || || || || || || Sbjct 520738 TCCTGAATTTTTGCT-TTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGAT 520796 Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || || |||| ||||| || |||||||||||| Sbjct 520797 GGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 520833 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| ||||| || ||||| || || || || ||||| || || | | | ||||| Sbjct 520851 AACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTC 520910 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC-AC 15272 | ||||| ||||| | ||||| | ||| || || || |||||||||||||| Sbjct 520911 AAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTG 520970 Query 15273 AAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTT 15332 || ||||||| || ||| |||| || || || || || || || || ||||| | Sbjct 520971 AATTTTTGCT-TTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCT 521029 Query 15333 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || |||| ||||| || |||||||||||| Sbjct 521030 TTCCGGTCAATGTTTTGACGAAAATTTGCATA 521061 >seq4069 Length=1127261 Score = 86.0 bits (94), Expect = 5e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 15174 CTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15233 ||||||| || || |||||| ||| | | | || || | ||||||||| ||| | | Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678 Query 15234 TCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTT 15293 | | || ||||| || |||||||| || ||||| || ||| ||| ||| | | Sbjct 161677 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 161618 Query 15294 CTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15353 | ||||||||| ||||| || | ||| ||||||||||| || || ||||| || | Sbjct 161617 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 161558 Query 15354 AAATTTGCAT 15363 | || ||||| Sbjct 161557 AGATCTGCAT 161548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362158793805243