Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 98.7 7e-16
seq3876 87.8 1e-12
>seq4552
Length=86203
Score = 98.7 bits (108), Expect = 7e-16
Identities = 150/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATCGTC 43971
|||| ||| || ||| |||||||||||||||||||| | | | || |||| ||
Sbjct 3540 ACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGC-CATCTTC 3482
Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031
| |||||| || ||||| |||| || ||||| ||| | || | || ||||| |||
Sbjct 3481 AAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCTTG 3422
Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091
||||| ||| || | ||| ||| |||| | || || |||| || || |||||
Sbjct 3421 GATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGACTTCGAGGGTGATGGTTTT 3362
Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
||| || | |||||||||||| || ||||||
Sbjct 3361 ACCCGTAAGAGTCTTCACAAAGATCTGCATG 3331
>seq3876
Length=890137
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATCGTC 43971
|||||||| || ||| ||||||||||| || || || | | || || |||| ||
Sbjct 521080 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTG-CGGCCATCTTC 521138
Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031
| |||||||| || || ||||| | ||||| || |||| | |||||||| |||
Sbjct 521139 AAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTG 521198
Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091
||||||| |||||| | | | || || | | ||| || || | ||| || |||||
Sbjct 521199 AATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTT 521258
Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
||||| || || || || || ||||||||
Sbjct 521259 TCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 82.4 bits (90), Expect = 5e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 43907 CTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCA 43966
|| || |||||||| || || || || ||||| |||||||| | ||| |
Sbjct 519934 CTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCG 519993
Query 43967 TCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTA 44026
|| || | |||||||| ||||| ||||||| ||||| || |||| | |||||||||
Sbjct 519994 TCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTA 520053
Query 44027 TCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATT 44086
||| |||||| || || | | | || || | | ||| || || | || ||
Sbjct 520054 TCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATA 520113
Query 44087 GTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||||||| || | |||||| ||||| || |||||
Sbjct 520114 GTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354757610832204
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |