Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 104 2e-17
>seq4552
Length=86203
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||||||||| | | || ||||| || ||||| ||||||||||| |||||||| |||
Sbjct 4244 TTCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGG 4185
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| |||| | |||||||| |||||| || || | || || | ||||||||| |
Sbjct 4184 AAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTG 4125
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | || |||||||| ||||| || || | ||| | || || |||
Sbjct 4124 GAATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGA 4065
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
||| | |||||||||||| ||||| | ||||| || || |||||||||
Sbjct 4064 CTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||||||||| | | || |||| ||| ||||| ||||||||||| || || |||||
Sbjct 3560 TTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAG 3501
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| |||| | |||||| | ||||||||| ||| |||| || | ||| ||||| ||
Sbjct 3500 AGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGG 3441
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | || |||||||| ||||| |||||| | ||| || || || |||
Sbjct 3440 GAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGA 3381
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| | ||| |||||||| || || | || || ||||| || |||||
Sbjct 3380 CTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056
|| || || || ||||||||||||||||| ||||||||||| | |||| | |||
Sbjct 4455 AAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCGTCT 4396
Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116
|||| ||| ||||| || | || | | ||||||||| || | |||||||||||
Sbjct 4395 TCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTGTCC 4336
Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176
|||||| ||||| | ||| || || || ||| ||| | || ||||||
Sbjct 4335 TGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATGGTT 4276
Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
|| || || | ||||| |||||||||||||||
Sbjct 4275 TTACCTGTGAGAGTTTTCACAAAAATTTGCATT 4243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419563559277063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |