Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 190 5e-43
seq4552 181 2e-40
seq3537 123 6e-23
>seq3876
Length=890137
Score = 190 bits (210), Expect = 5e-43
Identities = 179/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391
||| ||||| || | |||||| || || | |||||| |||||||||||||||||||| ||
Sbjct 519693 TCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAATATTATAGTCGGA 519752
Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451
|| ||| | || || ||||| || || || || ||||| || || |||||||| |||||
Sbjct 519753 TAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGG 519812
Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511
|| ||||||||||||||||| || ||||| || ||||| | || || || || ||
Sbjct 519813 AATGCCTTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAAC 519872
Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| ||||| |||||||| || || || ||||| ||||||||
Sbjct 519873 CTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920
Score = 168 bits (186), Expect = 2e-36
Identities = 168/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401
||||| | || | ||| | |||||||| |||||||| ||||| ||||| || || |
Sbjct 519931 AGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGG 519990
Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461
|||||||| || |||||||| ||||| || | |||||| ||||| ||||| || ||||||
Sbjct 519991 CCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCT 520050
Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521
||||| ||||| || || || || ||||| | || || || || ||||| |||||
Sbjct 520051 TTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTG 520110
Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| |||||||| || || || ||||| ||||||||
Sbjct 520111 ATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 150 bits (166), Expect = 4e-31
Identities = 161/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || | ||| | ||| |||||||| ||||| || |||||||| ||||| | || |||
Sbjct 521305 AGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 521364
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || |||||||| || ||||| | ||||| ||||| ||||| ||||||||||| ||
Sbjct 521365 TCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCT 521424
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
||||| |||||||| |||||||| | || || | || || || | || || ||
Sbjct 521425 TGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTT 521484
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || || ||||| ||||| |||||||||
Sbjct 521485 TTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || | ||| | ||| ||||| ||||||||||| |||||||| || || | || |||
Sbjct 520849 AGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCT 520908
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || |||||||||||||| || | || || ||||| ||||| ||||||||||| ||
Sbjct 520909 TCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCT 520968
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
||||| |||||||| |||||||| | || || | || || || | || || |||
Sbjct 520969 TGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTC 521028
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || | |||||| || || || |||||
Sbjct 521029 TTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 136 bits (150), Expect = 9e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 104345 CTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG 104404
|| || || | ||| | || ||||| ||||||||||| || || |||| || | |||
Sbjct 521530 CTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCCG 521589
Query 104405 TCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTA 104464
||||| || || |||||||| || || | | ||| ||||| || || || ||||| |||
Sbjct 521590 TCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTTA 521649
Query 104465 TCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATA 104524
|| || ||||||||||||||||| || | ||| || || ||| || || || || ||
Sbjct 521650 TCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAGGGTTATG 521709
Query 104525 GTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||||| || || | ||| || || || ||||||||
Sbjct 521710 GTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || | ||| | ||| |||||||| ||||| || |||||||| ||||| | || |||
Sbjct 521077 AGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 521136
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || |||||||| || || || | ||||| ||||| ||||| ||||||||||| ||
Sbjct 521137 TCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCT 521196
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
||||| |||||||| |||||||| | || || | || || || | || || ||
Sbjct 521197 TGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTT 521256
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || | |||||| || || || |||||
Sbjct 521257 TTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
>seq4552
Length=86203
Score = 181 bits (200), Expect = 2e-40
Identities = 178/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | || || ||||| | ||| |||||||| ||||||||||| |||
Sbjct 3561 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCA 3502
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| |||||||| || ||||| |||||||| ||||||||||| || | ||| ||||| ||
Sbjct 3501 GAGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGG 3442
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| ||||| ||||| || || || || ||||| |||||||| | || || || |||
Sbjct 3441 GGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCG 3382
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || || || ||||| ||||| || || ||||| ||||||||
Sbjct 3381 ACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 163 bits (180), Expect = 7e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410
|||| || | |||||||||||| || || || || ||||| |||||||| ||||||||
Sbjct 4452 ACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCGTCTTCC 4393
Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470
||||| || ||||| || |||| | ||||||||| ||||| ||||||||||| ||||||
Sbjct 4392 AGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTGTCCTGA 4333
Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530
|| || || || || ||||| | || || || ||| || || || || || || |||
Sbjct 4332 ATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATGGTTTTA 4273
Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || ||||| ||||| || ||||||
Sbjct 4272 CCTGTGAGAGTTTTCACAAAAATTTGCATT 4243
Score = 158 bits (174), Expect = 3e-33
Identities = 162/212 (76%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||||||||| ||||| || || || || || || ||||| || ||
Sbjct 3315 AGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATCC 3256
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|||||||| ||||||||||| |||| | || ||||| ||||| || |||||||| ||
Sbjct 3255 TCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCT 3196
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|| ||||| ||||| || || |||| || || || ||| ||||| || || || ||
Sbjct 3195 TGGATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTT 3136
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| ||||| || ||||||||||| || |||||
Sbjct 3135 TTCCCAGTGAGGGTTTTTACAAAGATTTGCAT 3104
Score = 150 bits (166), Expect = 4e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | || || ||||| | |||||||||||||| || ||||||||
Sbjct 3789 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCT 3730
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || ||||||||||| | ||||| ||||| || || | | || || ||||||
Sbjct 3729 GAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 3670
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || || ||||| |||||||| ||||||| || || | |||
Sbjct 3669 GGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCA 3610
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || || || || ||||| || || ||||| || || || ||||||
Sbjct 3609 ACTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3559
Score = 147 bits (162), Expect = 5e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| |||| || | || || ||||| | |||||||||||||| || ||||||||
Sbjct 4017 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCT 3958
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || ||||||||||| | ||||| ||||| || || | | || || ||||||
Sbjct 3957 GAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 3898
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || || || || |||||||| ||||||| || || | |||
Sbjct 3897 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCA 3838
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| || || || || || ||||| || || ||||| || || || ||||||
Sbjct 3837 ACTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3787
>seq3537
Length=3457499
Score = 123 bits (136), Expect = 6e-23
Identities = 153/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900
||||| ||| || | | || || ||||| | | ||||||||||||||| ||||||||
Sbjct 3064010 TTTATCTCTCATGTCTTAGCATTCTTTGCCGCTTCTGATGGTATCGTTAATGAAAATCTG 3064069
Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960
| |||| ||| |||| ||||| | ||||| ||||| | ||||| || || || ||
Sbjct 3064070 ATTGAGAGATTCAGTCAGGAGGTGAAAATTCCCGAAGCACGTTGTTTCTATGGCTTTCAA 3064129
Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGAT 269020
|| || ||||||||||||||||| |||||||| | | | || || |||||||| |
Sbjct 3064130 ATTGCCATAGAAAATATTCATTCTGAGATGTATTCTTTGCTCATTGAAACTTATATTTCT 3064189
Query 269021 GATAACAACGAAAAGAAAAGACTATTTT 269048
||| || |||||| |||| ||| ||
Sbjct 3064190 GATCCAAAAGAAAAG-TAAGAATATATT 3064216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151330200154084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |