Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq3506 96.9 4e-15 >seq3506 Length=651687 Score = 96.9 bits (106), Expect = 4e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| |||||||||||||| | ||| | ||||| |||||||| ||| || |||| Sbjct 176865 TTCATGATACAGTGGTTAATCAGCTTCTTGCAAAAATTGATGGTGTCGAACAATTGAATA 176806 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 | ||| | || | |||||||| || || ||| | || || || ||||||||| ||| Sbjct 176805 ACATTCTTGTTATTGGTATGACTAATAGAAGAGATATGATCGACGAAGCTTTATTAAGAC 176746 Query 164903 CTGGTCGATTAGA 164915 |||| |||| || Sbjct 176745 CTGGCAGATTGGA 176733 Score = 89.7 bits (98), Expect = 6e-13 Identities = 147/208 (71%), Gaps = 8/208 (4%) Strand=Plus/Minus Query 164498 AATTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAA 164557 |||| || || || ||| |||||||||| ||| | ||||||| |||||| || || | Sbjct 177268 AATTGGGTTGCAAGCATGTAAAAGGAATCTTACTGTATGGACCACCTGGTACAGGAAAGA 177209 Query 164558 CATTAATGGCTCGATGCAT-TGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTT 164613 | ||||||||||| || | ||| | |||||| | || ||| |||||||| Sbjct 177208 CGTTAATGGCTCGGCAAATAGGAACAA--TGTTAAATGCGAGGGAACCG--AAAATTGTA 177153 Query 164614 AATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTG 164673 |||||||| || | ||| | |||||||| || ||| || |||||| | |||| || Sbjct 177152 AATGGTCCACAAATTTTGGATAAATATGTTGGAGAGAGCGAGGCTAATATCAGAAGATTA 177093 Query 164674 TTTCAGGAGGCTGAAGAAGAACAAAAGA 164701 || || || ||||| ||| |||||| Sbjct 177092 TTCGCTGAAGCAGAAGACGAAGAAAAGA 177065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595837566046800