Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq3506 96.9 4e-15
>seq3506
Length=651687
Score = 96.9 bits (106), Expect = 4e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842
|||||||| |||||||||||||| | ||| | ||||| |||||||| ||| || ||||
Sbjct 176865 TTCATGATACAGTGGTTAATCAGCTTCTTGCAAAAATTGATGGTGTCGAACAATTGAATA 176806
Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902
| ||| | || | |||||||| || || ||| | || || || ||||||||| |||
Sbjct 176805 ACATTCTTGTTATTGGTATGACTAATAGAAGAGATATGATCGACGAAGCTTTATTAAGAC 176746
Query 164903 CTGGTCGATTAGA 164915
|||| |||| ||
Sbjct 176745 CTGGCAGATTGGA 176733
Score = 89.7 bits (98), Expect = 6e-13
Identities = 147/208 (71%), Gaps = 8/208 (4%)
Strand=Plus/Minus
Query 164498 AATTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAA 164557
|||| || || || ||| |||||||||| ||| | ||||||| |||||| || || |
Sbjct 177268 AATTGGGTTGCAAGCATGTAAAAGGAATCTTACTGTATGGACCACCTGGTACAGGAAAGA 177209
Query 164558 CATTAATGGCTCGATGCAT-TGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTT 164613
| ||||||||||| || | ||| | |||||| | || ||| ||||||||
Sbjct 177208 CGTTAATGGCTCGGCAAATAGGAACAA--TGTTAAATGCGAGGGAACCG--AAAATTGTA 177153
Query 164614 AATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTG 164673
|||||||| || | ||| | |||||||| || ||| || |||||| | |||| ||
Sbjct 177152 AATGGTCCACAAATTTTGGATAAATATGTTGGAGAGAGCGAGGCTAATATCAGAAGATTA 177093
Query 164674 TTTCAGGAGGCTGAAGAAGAACAAAAGA 164701
|| || || ||||| ||| ||||||
Sbjct 177092 TTCGCTGAAGCAGAAGACGAAGAAAAGA 177065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595837566046800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |