Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq3807 224 5e-54 >seq3807 Length=3737293 Score = 224 bits (248), Expect = 5e-54 Identities = 367/524 (70%), Gaps = 6/524 (1%) Strand=Plus/Minus Query 3617 AATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATG 3676 ||||||||| | || || || || || || ||||||||||||||||| ||||||||||| Sbjct 2633913 AATGAATTGCTGTACTTCGCAGATGTGTGTGCTGGTCCAGGTGGTTTTAGTGAATATATT 2633854 Query 3677 TTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGAT 3736 || | |||||||| ||| | |||||| | ||| | || || | |||||||| Sbjct 2633853 TTGTCAAGAAAGAAGTGGCACGCCAAAGGATTTGGATTCACTTTGAAGAATGAAAATGAT 2633794 Query 3737 TTTCAACTGAACAGATTT-TACGAT--AACTTTTCGGAAACTTTACACCCGTATTATGGT 3793 ||| | || | ||||| | || | | | | | |||||||| || |||| |||||| Sbjct 2633793 TTTTCATTGGAT-GATTTCTTCGCTGGACCATGT--GAAACTTTCCATCCGTTTTATGGC 2633737 Query 3794 CCGCTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATT 3853 | ||| | || ||| | | | | |||||||| | || ||| | ||| | Sbjct 2633736 ACCAAAAACAACGGAAATGTATTTGACGCGCAAAATCAAAGAGAGTTTAGATCGATGGTG 2633677 Query 3854 ATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTT 3913 ||| | |||| || || ||||||||||| || |||||| | || || || || || || Sbjct 2633676 ATGGGACATACTGATGGTAAAGGTGTACACTTCATGATGTCAGATGGAGGATTTTCAGTG 2633617 Query 3914 GAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTA 3973 || |||||||||||||| || || || |||||||| | | ||| | |||||||| ||| Sbjct 2633616 GAAGGTCAAGAAAATATACAGGAGATTTTATCGAAGCAATTATATCTATGTCAATGCTTA 2633557 Query 3974 ATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTT 4033 | || |||||||| | || ||||| |||| ||||| ||| | |||||| ||||| Sbjct 2633556 GTGGCGTTGATGATAGTGAGACCAGGTGGACATTTTGTTACAAAACTGTTCGATTTATTT 2633497 Query 4034 ACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATT 4093 ||||| ||||| | ||| | || ||| | ||||| | ||| | |||||| ||| Sbjct 2633496 ACACCATTTAGCGTTGGGCTTGTTTATCTAATGTACCATTGCTTTGAAAGTATTTCGATT 2633437 Query 4094 TTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTT 4137 ||||| || || | || |||| || ||||| ||| | || || Sbjct 2633436 TTCAAGCCGAATACTTCCAGACCAGCTAATTCAGAACGCTACTT 2633393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276538018192369