Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq3807 224 5e-54
>seq3807
Length=3737293
Score = 224 bits (248), Expect = 5e-54
Identities = 367/524 (70%), Gaps = 6/524 (1%)
Strand=Plus/Minus
Query 3617 AATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATG 3676
||||||||| | || || || || || || ||||||||||||||||| |||||||||||
Sbjct 2633913 AATGAATTGCTGTACTTCGCAGATGTGTGTGCTGGTCCAGGTGGTTTTAGTGAATATATT 2633854
Query 3677 TTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGAT 3736
|| | |||||||| ||| | |||||| | ||| | || || | ||||||||
Sbjct 2633853 TTGTCAAGAAAGAAGTGGCACGCCAAAGGATTTGGATTCACTTTGAAGAATGAAAATGAT 2633794
Query 3737 TTTCAACTGAACAGATTT-TACGAT--AACTTTTCGGAAACTTTACACCCGTATTATGGT 3793
||| | || | ||||| | || | | | | | |||||||| || |||| ||||||
Sbjct 2633793 TTTTCATTGGAT-GATTTCTTCGCTGGACCATGT--GAAACTTTCCATCCGTTTTATGGC 2633737
Query 3794 CCGCTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATT 3853
| ||| | || ||| | | | | |||||||| | || ||| | ||| |
Sbjct 2633736 ACCAAAAACAACGGAAATGTATTTGACGCGCAAAATCAAAGAGAGTTTAGATCGATGGTG 2633677
Query 3854 ATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTT 3913
||| | |||| || || ||||||||||| || |||||| | || || || || || ||
Sbjct 2633676 ATGGGACATACTGATGGTAAAGGTGTACACTTCATGATGTCAGATGGAGGATTTTCAGTG 2633617
Query 3914 GAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTA 3973
|| |||||||||||||| || || || |||||||| | | ||| | |||||||| |||
Sbjct 2633616 GAAGGTCAAGAAAATATACAGGAGATTTTATCGAAGCAATTATATCTATGTCAATGCTTA 2633557
Query 3974 ATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTT 4033
| || |||||||| | || ||||| |||| ||||| ||| | |||||| |||||
Sbjct 2633556 GTGGCGTTGATGATAGTGAGACCAGGTGGACATTTTGTTACAAAACTGTTCGATTTATTT 2633497
Query 4034 ACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATT 4093
||||| ||||| | ||| | || ||| | ||||| | ||| | |||||| |||
Sbjct 2633496 ACACCATTTAGCGTTGGGCTTGTTTATCTAATGTACCATTGCTTTGAAAGTATTTCGATT 2633437
Query 4094 TTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTT 4137
||||| || || | || |||| || ||||| ||| | || ||
Sbjct 2633436 TTCAAGCCGAATACTTCCAGACCAGCTAATTCAGAACGCTACTT 2633393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276538018192369
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |