Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 156 4e-33
seq4552 150 2e-31
seq4069 107 2e-18
seq3807 93.3 4e-14
>seq3876
Length=890137
Score = 156 bits (172), Expect = 4e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
||||| |||| || ||||| ||||| | ||| || || | |||| | ||| ||
Sbjct 521308 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521367
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
|||||||||||| | || || ||||| |||||||||||||| || ||||||||||| | |
Sbjct 521368 AGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGA 521427
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|||||||| ||||| ||| ||||||| ||||| || | |||||||||||||
Sbjct 521428 ATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTT 521487
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || ||||| ||||||||||||||
Sbjct 521488 CCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
||||| |||| || ||||| ||||| | ||| || || | |||| | ||| ||
Sbjct 521080 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521139
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
|||||||||||| | ||||| ||||| |||||||||||||| || ||||||||||| | |
Sbjct 521140 AGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGA 521199
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|||||||| ||||| ||| ||||||| ||||| || | |||||||||||||
Sbjct 521200 ATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTT 521259
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | ||||| || || || |||||
Sbjct 521260 CCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 136 bits (150), Expect = 4e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854
||| ||||| |||| ||||||||||| || | ||||||||| | || | ||
Sbjct 519936 CAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTC 519995
Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914
|| |||||||||||| ||||||| || || |||||||| |||||||| |||||||| ||
Sbjct 519996 TTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATC 520055
Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974
| |||||| ||||| ||| ||| ||||| | || || || | ||||| ||
Sbjct 520056 TTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGT 520115
Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| ||||| ||||| || ||||| ||||||||
Sbjct 520116 TTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
||||| |||| || |||||||| || | || || || | ||| | ||| ||
Sbjct 520852 ACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCA 520911
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||||||||| ||||||| |||||||||||||| ||||| || ||||||||||| | |
Sbjct 520912 AGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGA 520971
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|||||||| ||||| ||| ||||||| || || || | ||||||||| |||
Sbjct 520972 ATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTT 521031
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | ||||| || || || |||||
Sbjct 521032 CCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 123 bits (136), Expect = 2e-23
Identities = 173/241 (72%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || ||| || | || || | ||||| |||||||| |||||||| || | |
Sbjct 520366 AAAATTTGCATTCCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATG 520425
Query 94829 TTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886
|||||||| | | ||||| || || || |||||||||||| | ||||| || || |
Sbjct 520426 TTATAATC--TGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCT 520483
Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946
|||| || || || || ||||| ||||| | ||||||||| || ||| | | ||||
Sbjct 520484 GCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGT 520543
Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006
| | ||||| || | ||||| || || || || || ||||| ||||| || ||||
Sbjct 520544 CCGACGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCA 520603
Query 95007 T 95007
|
Sbjct 520604 T 520604
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854
||| || || |||| ||||||||||| || | ||||||||| | || | ||
Sbjct 520164 CAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTC 520223
Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914
|| |||||||||||| ||||||| || || |||||||||||||| || ||||| |||||
Sbjct 520224 TTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTC 520283
Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974
| |||||| || ||||| ||| ||||| | || || || | |||||||||
Sbjct 520284 TTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGT 520343
Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || | || || || || || |||||
Sbjct 520344 CTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 94796 AACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCC 94855
|| ||||| ||||| || ||||||||||| | ||| || || | || | |||
Sbjct 520621 AAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCT 520680
Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915
|| |||||||||||| | ||||| || || ||||| || ||||| || ||||| |||||
Sbjct 520681 TCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 520740
Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975
| ||||||||| || ||| | | ||||||| || || || | ||||||||
Sbjct 520741 TGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGTC 520800
Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || | ||||| || || || |||||
Sbjct 520801 TTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
>seq4552
Length=86203
Score = 150 bits (166), Expect = 2e-31
Identities = 152/198 (77%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
||||||||||| || | ||| |||||| | || || |||||| || || |||||
Sbjct 3300 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCTAGTTGCTTTCCA 3241
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
|||||||||| | |||||||||||||||||||||||||||||| | || || || |||
Sbjct 3240 GCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTAGCTTTG 3181
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | | |||||||| || || |||| ||||||||||| ||||| || |||
Sbjct 3180 ACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTTTTCCCAGTGAGGGTT 3121
Query 94991 TTCACAAAGATCTGCATG 95008
|| |||||||| ||||||
Sbjct 3120 TTTACAAAGATTTGCATG 3103
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836
||| ||||| | | ||| || || ||||| | |||||||| ||||| | ||| |||||
Sbjct 4474 CACACCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATC 4415
Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896
| ||| || || ||||| || || || | |||||||| | || ||||||||
Sbjct 4414 AGAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGG 4355
Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956
||| || ||||||||||| | |||||| ||||| ||| | | |||||| | ||
Sbjct 4354 AGGGATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTC 4295
Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| |||| ||||||||||| || || |||||||||||||| || |||||
Sbjct 4294 GACTTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244
Score = 129 bits (142), Expect = 5e-25
Identities = 172/237 (73%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || |||||||| | |||| |||| || | ||||||||| || || | |||||
Sbjct 4022 TTTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTAT 3963
Query 94833 AATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890
| || | | ||||| | || |||| |||||| || | ||||| || | ||||||
Sbjct 3962 AGTC--TGAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTG 3905
Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950
|| |||||||| ||||||||||| | ||||| || || ||| | | |||||||
Sbjct 3904 GTCAGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGA 3845
Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || |||| ||||||||||| || || ||||||||||| ||||| |||||
Sbjct 3844 GGCTTCAACTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788
Score = 125 bits (138), Expect = 6e-24
Identities = 171/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || |||||||| | |||| |||| || | ||||||||| || || | |||||
Sbjct 3794 TTTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTAT 3735
Query 94833 AATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890
| || | | ||||| | || |||| |||||| || | ||||| || | ||||||
Sbjct 3734 AGTC--TGAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTG 3677
Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950
|| |||||||| ||||||||||| | || || || || ||| | | |||||||
Sbjct 3676 GTCAGGAGGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGA 3617
Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || |||| ||||||||||| || || ||||||||||| ||||| |||||
Sbjct 3616 GGCTTCAACTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560
Score = 122 bits (134), Expect = 8e-23
Identities = 171/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || |||||||| | |||| |||||||| | || ||||| ||||| |
Sbjct 4255 AAAAATTTGCATTCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGAT 4196
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| || ||| | ||| || ||| ||||| ||||| ||| | ||||| | | ||
Sbjct 4195 GTTGTAGTCGGAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTG 4136
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||| || ||||| || |||||||| | ||||| ||||| ||| | | |||||
Sbjct 4135 TTGATCCGGTGGAATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTC 4076
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| || | || |||||||| || || ||||||||||| ||||| |||||
Sbjct 4075 TGAAGCTTCGACTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016
Score = 116 bits (128), Expect = 3e-21
Identities = 168/237 (71%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || |||||||| | |||| |||| || | || ||||| ||||| | ||||
Sbjct 3566 TTTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTAT 3507
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
|||| | ||| || ||| || || ||||| || |||| || | | |||||||
Sbjct 3506 AATCAGAGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGAT 3447
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
| || ||||| || |||||||| | ||||| || || || | | |||||| |
Sbjct 3446 CCGGGGGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAG 3387
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
||||| || | ||||||||||| || |||||||| |||||||||||||||||||
Sbjct 3386 CTTCGACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATGC 3330
>seq4069
Length=1127261
Score = 107 bits (118), Expect = 2e-18
Identities = 137/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATT 94879
||||| | ||||||||| || |||| ||||||||| ||||| ||| | |||||
Sbjct 161735 TTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATG 161676
Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939
| || || |||||||| ||||| || || ||||| | || || |||||||| ||
Sbjct 161675 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 161616
Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999
| || || | | || || || | ||||||||||| || || || |||||||| |||
Sbjct 161615 ATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGAAG 161556
Query 95000 ATCTGCATG 95008
|||||||||
Sbjct 161555 ATCTGCATG 161547
>seq3807
Length=3737293
Score = 93.3 bits (102), Expect = 4e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| ||| |||| || ||||| |||||||||||||| || | |||||| || |
Sbjct 26007 CCGCCTCGCAAGCGCAGTACTAAGTGTAAAGTAGATTCCTTCTGGATGTTATAGTCCGAC 26066
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || || ||||| || || || ||||||| |||||||| |||||||| |||
Sbjct 26067 AAAGTTCTGCCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTTTGTTGATCTGGCGGA 26126
Query 94901 ATACCT 94906
|| |||
Sbjct 26127 ATTCCT 26132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448265294372280
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