Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3876 156 4e-33 seq4552 150 2e-31 seq4069 107 2e-18 seq3807 93.3 4e-14 >seq3876 Length=890137 Score = 156 bits (172), Expect = 4e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| |||| || ||||| ||||| | ||| || || | |||| | ||| || Sbjct 521308 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521367 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||||||| | || || ||||| |||||||||||||| || ||||||||||| | | Sbjct 521368 AGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGA 521427 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 |||||||| ||||| ||| ||||||| ||||| || | ||||||||||||| Sbjct 521428 ATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTT 521487 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| |||||||||||||| Sbjct 521488 CCTGTCAGGGTTTTGACAAAGATCTGCAT 521516 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| |||| || ||||| ||||| | ||| || || | |||| | ||| || Sbjct 521080 ACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 521139 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||||||| | ||||| ||||| |||||||||||||| || ||||||||||| | | Sbjct 521140 AGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCTTGA 521199 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 |||||||| ||||| ||| ||||||| ||||| || | ||||||||||||| Sbjct 521200 ATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTT 521259 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| || || || ||||| Sbjct 521260 CCGGTCAATGTTTTGACGAAAATTTGCAT 521288 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854 ||| ||||| |||| ||||||||||| || | ||||||||| | || | || Sbjct 519936 CAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTC 519995 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 || |||||||||||| ||||||| || || |||||||| |||||||| |||||||| || Sbjct 519996 TTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATC 520055 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | |||||| ||||| ||| ||| ||||| | || || || | ||||| || Sbjct 520056 TTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGT 520115 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| ||||| ||||| || ||||| |||||||| Sbjct 520116 TTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| |||| || |||||||| || | || || || | ||| | ||| || Sbjct 520852 ACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCA 520911 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||||||||| ||||||| |||||||||||||| ||||| || ||||||||||| | | Sbjct 520912 AGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGA 520971 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 |||||||| ||||| ||| ||||||| || || || | ||||||||| ||| Sbjct 520972 ATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTT 521031 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| || || || ||||| Sbjct 521032 CCGGTCAATGTTTTGACGAAAATTTGCAT 521060 Score = 123 bits (136), Expect = 2e-23 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || ||| || | || || | ||||| |||||||| |||||||| || | | Sbjct 520366 AAAATTTGCATTCCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATG 520425 Query 94829 TTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 |||||||| | | ||||| || || || |||||||||||| | ||||| || || | Sbjct 520426 TTATAATC--TGAAAGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCT 520483 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 |||| || || || || ||||| ||||| | ||||||||| || ||| | | |||| Sbjct 520484 GCTGGTCCGGGGGGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGT 520543 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | ||||| || | ||||| || || || || || ||||| ||||| || |||| Sbjct 520544 CCGACGCTTCGACTTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCA 520603 Query 95007 T 95007 | Sbjct 520604 T 520604 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATC 94854 ||| || || |||| ||||||||||| || | ||||||||| | || | || Sbjct 520164 CAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTC 520223 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 || |||||||||||| ||||||| || || |||||||||||||| || ||||| ||||| Sbjct 520224 TTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTC 520283 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | |||||| || ||||| ||| ||||| | || || || | ||||||||| Sbjct 520284 TTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGT 520343 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | || || || || || ||||| Sbjct 520344 CTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 94796 AACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCC 94855 || ||||| ||||| || ||||||||||| | ||| || || | || | ||| Sbjct 520621 AAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCT 520680 Query 94856 TCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCA 94915 || |||||||||||| | ||||| || || ||||| || ||||| || ||||| ||||| Sbjct 520681 TCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 520740 Query 94916 TAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTT 94975 | ||||||||| || ||| | | ||||||| || || || | |||||||| Sbjct 520741 TGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGTC 520800 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | ||||| || || || ||||| Sbjct 520801 TTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832 >seq4552 Length=86203 Score = 150 bits (166), Expect = 2e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||||||||| || | ||| |||||| | || || |||||| || || ||||| Sbjct 3300 GTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTCTAGTTGCTTTCCA 3241 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||||||||| | |||||||||||||||||||||||||||||| | || || || ||| Sbjct 3240 GCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTAGCTTTG 3181 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | | |||||||| || || |||| ||||||||||| ||||| || ||| Sbjct 3180 ACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTTTTCCCAGTGAGGGTT 3121 Query 94991 TTCACAAAGATCTGCATG 95008 || |||||||| |||||| Sbjct 3120 TTTACAAAGATTTGCATG 3103 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 ||| ||||| | | ||| || || ||||| | |||||||| ||||| | ||| ||||| Sbjct 4474 CACACCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATC 4415 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | ||| || || ||||| || || || | |||||||| | || |||||||| Sbjct 4414 AGAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGG 4355 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 ||| || ||||||||||| | |||||| ||||| ||| | | |||||| | || Sbjct 4354 AGGGATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTC 4295 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| |||| ||||||||||| || || |||||||||||||| || ||||| Sbjct 4294 GACTTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244 Score = 129 bits (142), Expect = 5e-25 Identities = 172/237 (73%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||| | |||| |||| || | ||||||||| || || | ||||| Sbjct 4022 TTTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTAT 3963 Query 94833 AATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | || | | ||||| | || |||| |||||| || | ||||| || | |||||| Sbjct 3962 AGTC--TGAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTG 3905 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 || |||||||| ||||||||||| | ||||| || || ||| | | ||||||| Sbjct 3904 GTCAGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGA 3845 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || |||| ||||||||||| || || ||||||||||| ||||| ||||| Sbjct 3844 GGCTTCAACTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788 Score = 125 bits (138), Expect = 6e-24 Identities = 171/237 (72%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||| | |||| |||| || | ||||||||| || || | ||||| Sbjct 3794 TTTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTAT 3735 Query 94833 AATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | || | | ||||| | || |||| |||||| || | ||||| || | |||||| Sbjct 3734 AGTC--TGAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTG 3677 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 || |||||||| ||||||||||| | || || || || ||| | | ||||||| Sbjct 3676 GTCAGGAGGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGA 3617 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || |||| ||||||||||| || || ||||||||||| ||||| ||||| Sbjct 3616 GGCTTCAACTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560 Score = 122 bits (134), Expect = 8e-23 Identities = 171/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || |||||||| | |||| |||||||| | || ||||| ||||| | Sbjct 4255 AAAAATTTGCATTCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGAT 4196 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| || ||| | ||| || ||| ||||| ||||| ||| | ||||| | | || Sbjct 4195 GTTGTAGTCGGAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTG 4136 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||| || ||||| || |||||||| | ||||| ||||| ||| | | ||||| Sbjct 4135 TTGATCCGGTGGAATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTC 4076 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || | || |||||||| || || ||||||||||| ||||| ||||| Sbjct 4075 TGAAGCTTCGACTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016 Score = 116 bits (128), Expect = 3e-21 Identities = 168/237 (71%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||| || |||||||| | |||| |||| || | || ||||| ||||| | |||| Sbjct 3566 TTTGCATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTAT 3507 Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892 |||| | ||| || ||| || || ||||| || |||| || | | ||||||| Sbjct 3506 AATCAGAGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGAT 3447 Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952 | || ||||| || |||||||| | ||||| || || || | | |||||| | Sbjct 3446 CCGGGGGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAG 3387 Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||| || | ||||||||||| || |||||||| ||||||||||||||||||| Sbjct 3386 CTTCGACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATGC 3330 >seq4069 Length=1127261 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 94820 TTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATT 94879 ||||| | ||||||||| || |||| ||||||||| ||||| ||| | ||||| Sbjct 161735 TTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATG 161676 Query 94880 AATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCG 94939 | || || |||||||| ||||| || || ||||| | || || |||||||| || Sbjct 161675 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 161616 Query 94940 ACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAG 94999 | || || | | || || || | ||||||||||| || || || |||||||| ||| Sbjct 161615 ATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGAAG 161556 Query 95000 ATCTGCATG 95008 ||||||||| Sbjct 161555 ATCTGCATG 161547 >seq3807 Length=3737293 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| ||| |||| || ||||| |||||||||||||| || | |||||| || | Sbjct 26007 CCGCCTCGCAAGCGCAGTACTAAGTGTAAAGTAGATTCCTTCTGGATGTTATAGTCCGAC 26066 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || || ||||| || || || ||||||| |||||||| |||||||| ||| Sbjct 26067 AAAGTTCTGCCGTCTTCCAGTTGCTTACCAGCAAAGATCAATCTTTGTTGATCTGGCGGA 26126 Query 94901 ATACCT 94906 || ||| Sbjct 26127 ATTCCT 26132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448265294372280