Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3764 212 1e-50
seq3918 156 7e-34
seq2867 152 8e-33
>seq3764
Length=3140254
Score = 212 bits (234), Expect = 1e-50
Identities = 207/267 (78%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| |||||||| | | | |||||| ||||||||||| || ||||||||||||||||||
Sbjct 2290497 GCAAAGCGTCACAGGAAAGTTCTTCGCGATAACATCCAGGGTATCACCAAGCCAGCTATC 2290438
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| |||| || |||||||| ||||||||| | || || ||| |||| ||||| | |
Sbjct 2290437 CGTCGTTTGGCACGACGTGGTGGTGTCAAGCGTATATCCGGCTTGATCTACGAAGAAACT 2290378
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|| | ||| |||||| ||||||| ||| |||||| | |||||| | ||| |||||
Sbjct 2290377 CGAGGTGTGTTGAAGGTCTTCCTTGAGAACGTTATTCGCGATGCTGTAACCTACACCGAA 2290318
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| ||| | |||||||| ||| ||||||| |||| || || | ||||||||||||
Sbjct 2290317 CACGCGAAAAGGAAGACTGTAACCGCCATGGACGTCGTATACGCCCTCAAACGTCAAGGC 2290258
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | || || ||||| |||||
Sbjct 2290257 AGAACTCTGTACGGCTTTGGTGGTTAA 2290231
>seq3918
Length=5396348
Score = 156 bits (172), Expect = 7e-34
Identities = 178/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||| | ||||| | | ||||| ||||||||||| || || ||||| || || |||
Sbjct 5256344 GCGAAGAGACATCGTAAAGTACTTCGTGATAACATCCAGGGTATTACCAAACCGGCCATC 5256403
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|||||| |||| |||||||| |||||||| ||| | || |||||| | || || || |
Sbjct 5256404 CGTCGTTTGGCACGTCGTGGCGGAGTCAAACGTATTTCCGGATTGATTTACGAGGAAACA 5256463
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| ||||| | || | | | |||||| | ||| || | ||||||||||
Sbjct 5256464 CGTGGTGTACTGAAGGTGTTTTTAGAAAACGTTATTCGTGACGCGGTTACCTATACCGAG 5256523
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|| || ||| | |||||||| || ||||||| ||||||| || ||||||| |||||
Sbjct 5256524 CATGCAAAAAGAAAGACTGTAACTGCCATGGACGTCGTCTACGCCCTGAAACGCCAAGG 5256582
>seq2867
Length=5423913
Score = 152 bits (168), Expect = 8e-33
Identities = 184/249 (74%), Gaps = 1/249 (0%)
Strand=Plus/Plus
Query 16453 TCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTG 16511
|||| || |||||||||||||| ||||| |||||||| || ||||| ||||| | ||||
Sbjct 4771735 TCTTGCGTGATAACATCCAAGGTATCACGAAGCCAGCCATTCGTCGATTGGCTAGACGTG 4771794
Query 16512 GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571
|||| || |||||| | ||||| ||| |||| ||||||| | | ||| | || |||
Sbjct 4771795 GTGGTGTTAAGCGTATTTCTGGCTTGATCTACGAAGAGACCAGAGGTGTCCTAAAAGTCT 4771854
Query 16572 TCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631
| || | | |||||| | ||||||| | |||||||||||||| || | |||||||
Sbjct 4771855 TTCTGGAAAACGTTATTCGTGATGCTGTAACTTATACCGAGCACGCCAAGAGGAAGACTG 4771914
Query 16632 TCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTG 16691
| || | ||||| | || || || ||||||||||||| | | | || ||||| |
Sbjct 4771915 TAACAGCTATGGACGTGGTTTACGCTCTGAAACGTCAAGGAAGAACCCTCTACGGTTTCG 4771974
Query 16692 GAAGTTAAT 16700
| ||||||
Sbjct 4771975 GTGGTTAAT 4771983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79070973158739
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |