Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 118 9e-22
seq3876 95.1 1e-14
>seq4552
Length=86203
Score = 118 bits (130), Expect = 9e-22
Identities = 167/231 (72%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAA-CGGAG-TCCA 115343
||||| || ||||| || || || ||||| |||||||| ||| ||||| || || | ||
Sbjct 3332 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCA 3391
Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
| ||||| ||| | | || ||| ||||| || ||||| || | ||| ||||
Sbjct 3392 G--ACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATC 3449
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||| | || |||| ||| ||||||||| | ||||||| || ||| | | |||||||
Sbjct 3450 AGCAGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATA 3509
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
| ||||||||||| || || | ||| |||| || | | ||||||||||
Sbjct 3510 ATATTCAAAAAGAATCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGGAA 3560
Score = 93.3 bits (102), Expect = 4e-14
Identities = 162/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAA-ACGGAG-TCC 115342
||||||||| || || ||||| ||||| || |||||||||||| ||||| || || | |
Sbjct 4015 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTC 4074
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
| ||||| ||| | | ||||| ||||| || ||||| || | || |||
Sbjct 4075 A--GACACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGAT 4132
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
|| || | || || | || || |||||| | ||||||| || ||| | |||| ||
Sbjct 4133 CAACAGCGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTAC 4192
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
||||| |||||||| || || | || |||| || | | ||||||||||
Sbjct 4193 AACATCCAAAAAGAATCCACACTTCACTTGGTTCTGCGTCTTCGAGGAGGAA 4244
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAA-ACGGAG-TCC 115342
||||||||||||||| ||||| ||||| || |||||||| || | ||| || || | |
Sbjct 4243 AATGCAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTC 4302
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
| |||||| ||| | | || || |||||| || |||||||| |||| |||
Sbjct 4303 A--GACACTATTGAAAACGTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGAT 4360
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
|| || | | || | || ||||| ||| | ||||| | || ||| | | |||||
Sbjct 4361 CAACAGCGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTAC 4420
Query 115463 AACATTCAAAAAGAGTCTAC 115482
||||| |||||||| |||||
Sbjct 4421 AACATCCAAAAAGAATCTAC 4440
>seq3876
Length=890137
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||||||||| || ||||| || ||||| || || | || ||| |
Sbjct 519920 ATGCAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCG 519861
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | | || ||| |||||| |||||||||||| | || |||||
Sbjct 519860 GACACGATCGAAAACGTGAAAGCGAAAATTCAGGATAAAGAAGGCATTCCTCCCGATCAA 519801
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|||||||| |||| |||||||| || |||| |||| || | |||| |||||
Sbjct 519800 CAAAGACTGATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCCGACTATAAT 519741
Query 115466 ATTCAAAAAGAGTCTAC 115482
||||| |||||||||||
Sbjct 519740 ATTCAGAAAGAGTCTAC 519724
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
|||||| || ||||||||||| || || ||||||||||| || | ||| ||| |
Sbjct 521517 AATGCAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATC 521458
Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | | | || ||| ||||||| || |||||||| |||| |||||
Sbjct 521457 TGACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCA 521398
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| ||| | |||| || || ||||| | ||||||| | || | | || || ||
Sbjct 521397 GCAGAGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAA 521338
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494
|||||||||||| || || | ||| ||||
Sbjct 521337 CATTCAAAAAGAATCCACACTGCATTTGGT 521308
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| |||||||| | || ||||||||||| || | ||| ||| |
Sbjct 521288 ATGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521229
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | | || ||| ||||||| || |||||||| |||| ||||||
Sbjct 521228 GACACGATCGAAAATGTCAAAGCAAAAATTCAAGACAAAGAAGGAATCCCTCCAGATCAG 521169
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| ||| | || | || || ||||| | ||||||| | || | | || || |||
Sbjct 521168 CAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTACAAC 521109
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGT 115494
||||||||||| || || | ||| ||||
Sbjct 521108 ATTCAAAAAGAATCCACACTGCATTTGGT 521080
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||||||||| || ||||| || ||||| || || | || ||| |
Sbjct 520148 ATGCAGATTTTTGTCAAGACTCTCACTGGTAAAACTATCACACTGGAGGTTGAGGCTTCG 520089
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| | | | | || || |||||| |||||||||||| | || ||||||
Sbjct 520088 GACACGATCGAAAACGTGAAGGCGAAAATTCAAGATAAAGAAGGCATTCCTCCCGATCAG 520029
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| || | || | ||| || ||||| | ||||| | | || | | |||||||||
Sbjct 520028 CAGAGGTTGATCTTTGCCGGAAAACAGCTCGAAGACGGCCGTACGCTTTCTGATTATAAC 519969
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAG 115500
||||| || || ||||| | ||| |||| |||||
Sbjct 519968 ATTCAGAAGGAATCTACCCTGCATTTGGTTTTGAG 519934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425320034922760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |