Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4552 102 7e-17 seq3876 98.7 8e-16 >seq4552 Length=86203 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| |||| ||| || ||||| || ||||| || || || || | Sbjct 3558 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 3499 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || || | ||||||||| ||| |||| || ||||| || ||| || Sbjct 3498 AGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 3439 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| || || ||| ||||| | | | |||||| | || Sbjct 3438 ATTCCCTCTTTGTCTTGGATTTTGGCT--TTCACATTTTCAATAGTGTCTGAAGCTTCGA 3381 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||||||||| || || || || || ||||| |||||||| Sbjct 3380 CTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | ||| |||| || || ||||| || ||||| ||||||||||||| Sbjct 4242 CCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAA 4183 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || | || |||| |||||| || || | || || |||||||| ||| || Sbjct 4182 AGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGA 4123 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||||||||| |||| ||| || | | | ||||| | || | Sbjct 4122 ATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACT 4063 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||| |||||||| ||||| || ||||| || || || |||||| Sbjct 4062 TCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || || || ||||| |||||||| || | | ||| || |||| |||| ||| Sbjct 4446 TGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCGTCTTCCAGTTGC 4387 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || | |||||||| || ||| | || |||||||| ||||| Sbjct 4386 TTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTGTCCTGAATTTTG 4327 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | |||||| | || ||| | ||||||||||| || || Sbjct 4326 GCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATGGTTTTACCTGTG 4267 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 || ||||| |||||||| |||||| Sbjct 4266 AGAGTTTTCACAAAAATTTGCATT 4243 >seq3876 Length=890137 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| | |||| ||||| ||||| |||||||| ||||||||||| | Sbjct 520606 CCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAA 520665 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | ||||| || || | || | || ||| |||||| ||| Sbjct 520666 AGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 520725 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGC-TTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || || ||||| ||||| ||| ||||| | | | ||||| | ||| Sbjct 520726 ATTCCTTCCTTGTCCTGAATTT-TTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAAC 520784 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| |||||||| |||||||||| |||||||| ||||| ||||| Sbjct 520785 TTCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| ||||| || ||||| ||||||||||| | | || | | || Sbjct 521305 AGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCT 521364 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||||| || || |||| | | ||| || || ||| | || |||||||| Sbjct 521365 TCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCT 521424 Query 16844 GCAATTTGCTGCTTC-ACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||||| ||||| || | | | ||||| | ||| ||||| |||||||| Sbjct 521425 TGAATTTT-TGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGT 521483 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||||| ||||| ||||||||||| ||||||||| Sbjct 521484 TTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||||| |||| |||||| || || ||||| || ||||| || || | Sbjct 519922 CCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 519981 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| || | ||||| || ||| | || | || ||| || || ||| Sbjct 519982 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGA 520041 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| ||||| || ||||| | |||||| | | | ||||| | ||| Sbjct 520042 ATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACC 520101 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| ||||| || || || || ||||||||||||||||| Sbjct 520102 TCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405065176202770