Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq3537 224 7e-54
seq4435 125 5e-24
seq3869 116 2e-21
seq3876 113 3e-20
seq4552 111 1e-19
seq4069 98.7 7e-16
>seq3537
Length=3457499
Score = 224 bits (248), Expect = 7e-54
Identities = 322/452 (71%), Gaps = 4/452 (1%)
Strand=Plus/Plus
Query 6152 ATCGACCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTA 6211
|||| ||| ||||||| | | ||||| ||||| ||||| || || || || || ||
Sbjct 3056035 ATCGGTCACCATGGGGAGCGTAAACGTCAATCGCAATGTCAGCGATGCTTTTTATCGTTA 3056094
Query 6212 CAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCAT 6271
|| |||||||| ||| || ||||| || || |||||||| |||||||| || || ||
Sbjct 3056095 TAAGATGCCGCGGATCCAAGCGAAGGTGGAAGGCAAGGGAAATGGTATTAAGACAGTGAT 3056154
Query 6272 TGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATA 6331
||||||||| || || || |||||| |||| || || || || || ||||| || ||
Sbjct 3056155 CGTCAACATGGTGGATGTGGCGAAGGCGATCGGTCGTCCGGCTACGTATCCGACCAAGTA 3056214
Query 6332 TTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGT 6391
||| || ||||| | |||||||| ||||||||||| ||| ||||| |||||||| ||
Sbjct 3056215 TTTTGGTTGCGAGTTGGGCGCTCAAACGCAGTTTGACTTCAAGAACGAACGCTTCATTGT 3056274
Query 6392 TAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTT 6451
||||| || || | | | ||||| ||||| | | || || ||||| || || |
Sbjct 3056275 CAACGGTTCACACGATGCGACAAAGCTACAGGATCTGTTGGATGGTTTTATCCGAAAATA 3056334
Query 6452 TGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCTACCAAGAGAAA 6511
||| || || | | ||||| || ||||| ||||| | || || | | |||| |
Sbjct 3056335 TGTTCTTTGCCCAGCCTGCGACAATCCGGAAACCGAATTAATGGTCAGTTCGAAGAAAGG 3056394
Query 6512 CACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGATTTATCA--CAC 6569
|| ||||| ||||| ||||||||||| || | |||||| || || | || |||
Sbjct 3056395 AACGATCTCGCAGGGTTGCAAAGCGTGTGGACATCATGGCCTTCTTGA--GAGCAATCAC 3056452
Query 6570 AAACTCAACACCTTCATACTGAAGAATCCTCC 6601
|| | ||||| | ||| |||| ||||| ||
Sbjct 3056453 AAGTTGAACACGTACATCTTGAAAAATCCACC 3056484
>seq4435
Length=230038
Score = 125 bits (138), Expect = 5e-24
Identities = 74/77 (96%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 15073 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 15132
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 15133 GGTCGTATTTAGCCTTA 15149
>seq3869
Length=61123
Score = 116 bits (128), Expect = 2e-21
Identities = 72/77 (94%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 26532 CTCTCTCTTCAAAATTCTTTTCAACTTTCCCTCACGGTACTTATTCGCTATCGGTCTCGT 26591
Query 20007 GGTAATATTTAGCCTTA 20023
||| ||||||||||||
Sbjct 26592 GGTCGTATTTAGCCTTA 26608
>seq3876
Length=890137
Score = 113 bits (124), Expect = 3e-20
Identities = 165/232 (71%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | ||| | | |||||||| |||||| ||||| |||||||||||||
Sbjct 521514 CATT-CCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAAT 521572
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| || || |||| |||| || | || ||||| || || || | || || |||||||
Sbjct 521573 CGGATAAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGG 521632
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
|||| ||||| || || || ||| || ||||||| || || || | ||
Sbjct 521633 GTGGGATACCTTCCTTATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTT 521692
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| | || || || || || ||||| || |||||||| ||||||||
Sbjct 521693 CAACTTCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | ||||| | |||||||| || ||| ||||| ||||||||||| ||||
Sbjct 520832 TACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAG 520891
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | || | || || | |||||||| ||||| || | | ||| ||||| | |
Sbjct 520892 AAAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAG 520951
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||||||||| ||||||| || ||||| | || || || ||||
Sbjct 520952 GGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAA 521011
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || || || || || || ||||| ||||| ||||| || |||||
Sbjct 521012 CTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 102 bits (112), Expect = 5e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | ||||| | |||||||| || ||| || |||||||| ||||| ||||
Sbjct 521060 TACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAG 521119
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | | || | || || | ||||||||||| || || | | || ||||| | |
Sbjct 521120 AAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAG 521179
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||||||||| ||||||| || ||||| | || || || || |
Sbjct 521180 GGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGA 521239
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || || || ||||| || ||||| ||||| ||||| || |||||
Sbjct 521240 CTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 102 bits (112), Expect = 5e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | ||||| | |||||||| || ||| || |||||||| ||||| ||||
Sbjct 521288 TACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAG 521347
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | | || | || || | ||||||||||| || || | | || ||||| | |
Sbjct 521348 AAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAG 521407
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| ||||||||||| ||||||| || ||||| | || || || || |
Sbjct 521408 GGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGA 521467
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| || || || ||||| || |||| |||||| || || ||||||||
Sbjct 521468 CTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
||| |||||||| || || ||||| ||||| || |||||||| | ||| ||||
Sbjct 519936 CAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTC 519995
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | |||||||||||||| || | | || ||||||| || | ||||||||| ||
Sbjct 519996 TTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATC 520055
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
|||||| |||||| || | || || || | ||||| || | ||| |||||
Sbjct 520056 TTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGT 520115
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||| || | || || || || ||||||||
Sbjct 520116 TTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165
|| |||||||| | ||| ||||||||||| ||||| ||||| | ||| | ||
Sbjct 520621 AAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCT 520680
Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225
|| | ||||||||||| || || | | || || || | |||| ||||| ||||||
Sbjct 520681 TCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 520740
Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285
||||||| ||||| |||| | || || |||||||| ||||| || ||
Sbjct 520741 TGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGTC 520800
Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || ||||| ||||| ||||| || |||||
Sbjct 520801 TTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
||||| || ||| || |||||||| || || || ||| ||| | || |||| ||
Sbjct 519718 TGAAGTGTAGACTCTTTCTGAATATTATAGTCGGATAAAGTCCGTCCATCCTCTAGCTGC 519777
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| || || || || || | ||||||||||| || | ||||||||| ||| ||||||
Sbjct 519778 TTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTCTTTATCCTGAATTTTC 519837
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294
||||| || | || || || | ||||| || | ||| ||||||||||| ||
Sbjct 519838 GCTTTCACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTTTTACCAGTG 519897
Query 38295 AAGGTTTTCACGAATATCTGCAT 38317
| || || || || ||||||||
Sbjct 519898 AGAGTCTTGACAAAAATCTGCAT 519920
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
||| || ||||| || || ||||| ||||| || |||||||| | ||| ||||
Sbjct 520164 CAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTC 520223
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | |||||||||||||| || | | || ||||| | |||| ||||| |||||
Sbjct 520224 TTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTC 520283
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAACTTCTAATGTAATAG 38283
|||||| || ||||||| || || || | || |||||||| || || || |
Sbjct 520284 TTGAATTTTGGCTTTGACATTCTCGATCGTGTC-CGACGCCTCAACTTCCAACGTGATGG 520342
Query 38284 TTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| || || || || || || ||||| || |||||
Sbjct 520343 TCTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376
>seq4552
Length=86203
Score = 111 bits (122), Expect = 1e-19
Identities = 165/233 (71%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| || |||| | ||||| |||| |||||| ||| || ||||||||||| ||||
Sbjct 3562 CATT-CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAAT 3504
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
|||| | | | | || || | |||||| || ||||| || || || || ||||| |
Sbjct 3503 CAGAGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCG 3444
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||| | || |||||||| ||||| |||||||| | | ||| ||| | ||
Sbjct 3443 GGGGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTT 3384
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
| ||||| | || || ||||||||||| | || ||||| || |||||||||
Sbjct 3383 CGACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATG 3331
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
|| ||||| || ||||||||||| | | | |||| || | ||| || || || ||
Sbjct 4434 TCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAG 4375
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|||| || |||||||| | |||| |||||||||||| |||||| |||||| ||
Sbjct 4374 ATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTT 4315
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| | ||| ||| | ||| ||||| | || || |||||||| || | ||||||||
Sbjct 4314 TCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACA 4255
Query 38307 AATATCTGCAT 38317
|| || |||||
Sbjct 4254 AAAATTTGCAT 4244
Score = 95.1 bits (104), Expect = 8e-15
Identities = 161/232 (69%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| || |||| | ||||| ||||| ||||| ||| || ||||| || ||||| |
Sbjct 4246 CATT-CCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGT 4188
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| || | | | | || || | |||||| ||||| || || || || |||||||| |
Sbjct 4187 CGGAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCG 4128
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
|| | || ||||||||| ||||| ||| || || | | || ||| | ||
Sbjct 4127 GTGGAATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTT 4068
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| | ||||| |||||||| || | ||||||||||| || |||||
Sbjct 4067 CGACTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016
>seq4069
Length=1127261
Score = 98.7 bits (108), Expect = 7e-16
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 38130 TTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATT 38189
||||| ||||| ||||| |||| | ||| | || || | |||||| ||||| || ||
Sbjct 161735 TTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATG 161676
Query 38190 AGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGG 38249
|| || |||||||| | || | || || |||||| || || ||| ||||||| |
Sbjct 161675 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 161616
Query 38250 ACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAAT 38309
| ||||| || || || | || || ||||||||||| | ||||||||||||
Sbjct 161615 ATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGAAG 161556
Query 38310 ATCTGCATG 38318
|||||||||
Sbjct 161555 ATCTGCATG 161547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334928328132713
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |