Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 147 2e-30
seq3876 145 7e-30
seq4069 109 5e-19
>seq4552
Length=86203
Score = 147 bits (162), Expect = 2e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| | || |||||| ||||||| ||||||| || | ||
Sbjct 3332 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCA 3391
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|||||||| || |||| |||||| |||||||| || ||||| || || ||
Sbjct 3392 GACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCAG 3451
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | |||||||| ||||||||| | ||||||| | ||| | ||||| |||
Sbjct 3452 CAGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAAT 3511
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||||||||||||||| || ||| | || || | || |||||||||
Sbjct 3512 ATTCAAAAAGAATCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGGAA 3560
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || || ||| | ||||||||| |||| || ||||||| || | ||
Sbjct 4015 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTC 4074
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| |||||| |||||||| || |||||||| || ||
Sbjct 4075 AGACACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATCA 4134
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||||| | || || ||||| |||||| | ||||||| | ||| | ||| |||||
Sbjct 4135 ACAGCGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAA 4194
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|| |||||||||||||| || || || || || | || |||||||||
Sbjct 4195 CATCCAAAAAGAATCCACACTTCACTTGGTTCTGCGTCTTCGAGGAGGAA 4244
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||| || ||| | || |||||| ||||||| | ||||| || | ||
Sbjct 4243 AATGCAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTC 4302
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || ||||| | |||| ||| ||||||||||| || || || || |
Sbjct 4303 AGACACTATTGAAAACGTGAAGGCCAAAATTCAG-GACAAAGAAGGAATCCCTCCAGATC 4361
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||||| | || || || ||||| ||| | ||||| | | ||| | |||||||
Sbjct 4362 AACAGCGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACA 4421
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||||||||| || || || ||||| || | || | |||||
Sbjct 4422 ACATCCAAAAAGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 4470
Score = 109 bits (120), Expect = 5e-19
Identities = 166/234 (71%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || || ||| | ||||||||| ||||||| | ||||| || | ||
Sbjct 3787 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACTCTTGAAGTTGAAGCCTC 3846
Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|||||| || || || | |||| |||| || ||||||||||| ||||| ||||
Sbjct 3847 TGACACAATAGAAAACGTAA---AAGCTAAAATCCAA-GACAAAGAAGGCATTCCTCCTG 3902
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
|||| || || | || || || || ||||| || ||||| | | | || | || |
Sbjct 3903 ACCAGCAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACT 3962
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
| || || || |||||||| || || ||| | || || | || |||||||||
Sbjct 3963 ATAACATCCAGAAAGAATCTACTCTTCATCTGGTTCTGCGTCTTCGAGGAGGAA 4016
Score = 105 bits (116), Expect = 6e-18
Identities = 165/234 (71%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| || || || ||| | ||||||||| ||||||| | ||||| || | ||
Sbjct 3559 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTC 3618
Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|||||| || || || | |||| || | || ||||||||||| ||||| ||||
Sbjct 3619 TGACACAATAGAAAACGTAA---AAGCTAAGATCCAA-GACAAAGAAGGCATTCCTCCTG 3674
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
|||| || || | || || || || ||||| || ||||| | | | || | || |
Sbjct 3675 ACCAGCAACGTTTGATCTTCGCTGGTAAACAGTTGGAAGACGGTAGGACACTCTCAGACT 3734
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
| || || || |||||||| || || ||| | || || | || |||||||||
Sbjct 3735 ATAACATCCAGAAAGAATCTACTCTTCATCTGGTTCTGCGTCTTCGAGGAGGAA 3788
Score = 100 bits (110), Expect = 2e-16
Identities = 153/216 (71%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| |||||||| || | || || ||| ||||||| | || ||||| | |||
Sbjct 3104 ATGCAAATCTTTGTAAAAACCCTCACTGGGAAAACCATCACCCTTGAGGTGGAAGCTTCT 3163
Query 25059 GACACTATCGAG----TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|||||||| ||| ||| |||| || | || ||||||||||| ||||| || ||
Sbjct 3164 GACACTATAGAGAACGTCA---AAGCTAAGATCCAA-GACAAAGAAGGTATTCCTCCAGA 3219
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| || || | || ||||| || || ||| |||| |||| | || | ||||||
Sbjct 3220 TCAGCAACGTTTAATCTTTGCTGGAAAGCAACTAGAGGATGGCAGAACCCTTTCCGATTA 3279
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| || || || ||||| || || ||| | || ||
Sbjct 3280 CAACATCCAGAAGGAATCTACACTTCATCTTGTTCT 3315
>seq3876
Length=890137
Score = 145 bits (160), Expect = 7e-30
Identities = 163/216 (75%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || |||||||| ||| ||||||| | ||||| ||| | |||
Sbjct 521288 ATGCAAATTTTCGTCAAAACATTGACCGGAAAAACCATCACGTTGGAAGTCGAGGCATCT 521229
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| ||||||||| ||| ||||||||||| || || || ||
Sbjct 521228 GACACGATCGAAAATGTCA---AAGCAAAAATTCAA-GACAAAGAAGGAATCCCTCCAGA 521173
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| ||| | | || || ||||| ||||| | ||||||| |||||| | || ||
Sbjct 521172 TCAGCAGAGATTGATCTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACTA 521113
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||| ||||||||||||||||| || ||||| || ||
Sbjct 521112 CAACATTCAAAAAGAATCCACACTGCATTTGGTTCT 521077
Score = 141 bits (156), Expect = 8e-29
Identities = 163/217 (75%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || || |||| || ||| ||||||| | ||||| ||| | ||
Sbjct 521517 AATGCAGATCTTTGTCAAAACCCTGACAGGAAAAACCATCACGTTGGAAGTCGAGGCATC 521458
Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113
|||||| ||||| |||| ||||||||| ||| ||||||||||| || || || |
Sbjct 521457 TGACACGATCGAAAATGTCA---AAGCAAAAATTCAA-GACAAAGAAGGAATCCCTCCAG 521402
Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173
| || ||| | | ||||| ||||| ||||| | ||||||| |||||| | || |
Sbjct 521401 ATCAGCAGAGATTGATTTTCGCCGGAAAACAGCTTGAAGATGGCCGCACTCTTTCTGACT 521342
Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||| ||||||||||||||||| || ||||| || ||
Sbjct 521341 ACAACATTCAAAAAGAATCCACACTGCATTTGGTTCT 521305
Score = 127 bits (140), Expect = 2e-24
Identities = 159/216 (74%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || |||||||| || ||||||| | ||||| ||| | |||
Sbjct 521060 ATGCAAATTTTCGTCAAAACATTGACCGGAAAGACCATCACGTTGGAAGTTGAGGCATCT 521001
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| ||||||||| ||| ||||||||||| || || || ||
Sbjct 521000 GACACGATCGAAAATGTCA---AAGCAAAAATTCAA-GACAAAGAAGGAATCCCTCCGGA 520945
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|| || | | || ||||| || ||||| | ||||||| ||||| | || ||
Sbjct 520944 TCAGCAAAGATTGATCTTTGCTGGAAAACAGCTTGAAGATGGCCGCACACTTTCTGACTA 520885
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||||||| || |||||||| || ||||| || ||
Sbjct 520884 CAATATTCAGAAGGAATCCACACTGCATTTGGTTCT 520849
Score = 107 bits (118), Expect = 2e-18
Identities = 158/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
|| ||||| || || || ||||| |||||||| || |||| || | ||||| || |
Sbjct 521747 ACTATGCAGATTTTCGTGAAGACATTGACCGGGAAGACCATAACCCTTGAAGTTGAAGCT 521688
Query 25056 TCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
|||||||| |||||| | || ||||||| | || || || ||||| || |||||
Sbjct 521687 TCTGACACCATCGAG--AATGTAAAAGCAAAGATCCAA-GATAAGGAAGGTATCCCACCC 521631
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
|| || ||||| | || || || || || || | ||||| | || || | ||||
Sbjct 521630 GATCAGCAGCGTTTGATCTTCGCTGGAAAGCAGCTTGAAGACGGACGTACCTTATCCGAT 521571
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAG 25213
||||||||||| || |||||||| || ||||| || || ||
Sbjct 521570 TACAATATTCAGAAGGAATCCACTCTCCATTTGGTCCTCAG 521530
>seq4069
Length=1127261
Score = 109 bits (120), Expect = 5e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || || || | || |||||| ||||||| |||| || ||| | ||
Sbjct 161548 ATGCAGATCTTCGTGAAAACCCTCACGGGTAAAACCATCACCCTCGAGGTAGAGGCCTCC 161607
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || |||||| | ||| || ||| ||||| || || ||||| || || |||
Sbjct 161608 GATACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCAGATCAA 161667
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || |||||||||||| | || |||| |||||| || |||||| |||
Sbjct 161668 CAGCGACTCATCTTCGCCGGCAAACAACTGGAGGATGGACGCACTCTGTCCGATTATAAT 161727
Query 25179 ATTCAAAAAG 25188
|| |||||||
Sbjct 161728 ATCCAAAAAG 161737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433303585081745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |