Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq4552 104 2e-17 >seq4552 Length=86203 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| || || | || || |||||||| ||| | ||| ||| | Sbjct 3332 ATGCAGATCTTTGTGAAGACTCTTACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCA 3391 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || || ||| | || ||| ||||| |||||||| || ||||| ||||| Sbjct 3392 GACACTATTGAAAATGTGAAAGCCAAAATCCAAGACAAAGAGGGAATTCCCCCGGATCAG 3451 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | || |||| ||| ||||||||| | |||||| | |||| | | ||||||||| Sbjct 3452 CAGCGTCTGATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTCTCTGATTATAAT 3511 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||||||||| ||||| ||| | || ||||||| || || || Sbjct 3512 ATTCAAAAAGAATCCACACTTCATCTGGTTCTGCGTCTTCGAGGAGG 3558 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||| || || ||||| | ||||| |||||||||||| | ||| ||| | Sbjct 4015 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACCCTCGAAGTCGAAGCTTC 4074 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || | ||| | ||||| ||||| |||||||| || |||| ||||| Sbjct 4075 AGACACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAGGGAATTCCACCGGATCA 4134 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| | || || | || || |||||| |||||||| | |||| | |||| || || Sbjct 4135 ACAGCGTCTGATCTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAA 4194 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||||||||| ||||| || || || ||||||| || || || Sbjct 4195 CATCCAAAAAGAATCCACACTTCACTTGGTTCTGCGTCTTCGAGGAGG 4242 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||||||||| ||||| | || || |||||||| || | ||| ||| | Sbjct 4243 AATGCAAATTTTTGTGAAAACTCTCACAGGTAAAACCATCACTCTTGAAGTCGAAGCTTC 4302 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || || ||| | || || |||||| ||||||||||| | || ||||| Sbjct 4303 AGACACTATTGAAAACGTGAAGGCCAAAATTCAGGACAAAGAAGGAATCCCTCCAGATCA 4362 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| | | || | || ||||| ||| ||||||| | |||| | | ||||| || Sbjct 4363 ACAGCGTTTAATCTTCGCTGGCAAGCAACTGGAAGACGGCAGAACTCTTTCTGATTACAA 4422 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||||||||||||||| || ||||| || || || ||||| || Sbjct 4423 CATCCAAAAAGAATCTACACTCCACTTAGTTTTACGACTTCGCGGAGG 4470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423016164736600