Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 140 3e-28
seq3876 127 2e-24
>seq4552
Length=86203
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | || ||| || || | || ||||||||||| |||||||| |||
Sbjct 4245 ATTCCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCG 4186
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| | |||||| ||||||||||| ||| |||| ||||||||||| |||||
Sbjct 4185 GAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGT 4126
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || |||||||| || || |||| | ||||| |||||| | | ||||
Sbjct 4125 GGAATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCG 4066
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | ||||| ||||| |||||||| || || || |||||
Sbjct 4065 ACTTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016
Score = 136 bits (150), Expect = 3e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| || || |||| |||||||| || | |||||||||||||| |||||||||||
Sbjct 4471 ACCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGA 4412
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
| ||| | ||||| ||||| || |||||| |||| | ||||||||| || |||||
Sbjct 4411 AAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGG 4352
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
|| ||||||||||| ||| || || | | ||||| ||||| | | ||||||
Sbjct 4351 GATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGAC 4292
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | ||||| || || |||||||| |||||||| |||||
Sbjct 4291 TTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244
Score = 125 bits (138), Expect = 6e-24
Identities = 168/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | || ||| | ||| | || |||||||||||||| || |||||
Sbjct 3561 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCA 3502
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| | ||||||||||||||| ||||| | || |||||||| || |||||
Sbjct 3501 GAGAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGG 3442
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| || |||||||| || || ||| | | ||||| ||||| | | ||||
Sbjct 3441 GGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCG 3382
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386
|| || | ||| | ||||| || || ||||| || ||||| ||||||||| ||
Sbjct 3381 ACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCATGCCT 3328
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | || ||| | ||| | ||||||||||| || ||||| || ||
Sbjct 3789 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCT 3730
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | | ||||| | |||||||||||| |||| | ||| || ||||| |||
Sbjct 3729 GAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 3670
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| ||||| ||||| | ||| | ||||| | || |||
Sbjct 3669 GGAATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCA 3610
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | ||||| ||||| |||||||| || || || |||||
Sbjct 3609 ACTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || || || | || ||| | ||| | ||||||||||| || ||||| || ||
Sbjct 4017 ATTCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCT 3958
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | | ||||| | |||||||||||| |||| | ||| || ||||| |||
Sbjct 3957 GAGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGA 3898
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||||||||| || || ||||| | ||| | ||||| | || |||
Sbjct 3897 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCA 3838
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | ||||| ||||| |||||||| || || || |||||
Sbjct 3837 ACTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | || ||| | ||| | |||||||| || || ||||||||||||
Sbjct 3333 ATGCCTCCACGAAGACGCAGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCG 3274
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || | ||| || ||||| || ||||| |||| | ||| || || || |||
Sbjct 3273 GAAAGGGTTCTGCCATCCTCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGA 3214
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||| ||||||||||| ||||| ||| | | || | ||||| | | |||
Sbjct 3213 GGAATACCTTCTTTGTCTTGGATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCC 3154
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | ||||| || || || ||||||||||| || ||||||
Sbjct 3153 ACCTCAAGGGTGATGGTTTTCCCAGTGAGGGTTTTTACAAAGATTTGCATG 3103
>seq3876
Length=890137
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||||| | | ||| ||||| | || |||||||||||||||||||| ||
Sbjct 521059 ATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCA 521118
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||||||||| ||||| || ||| |||| | | ||| || || |||
Sbjct 521119 GAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGA 521178
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||||||||| ||| ||| ||| | | ||| | ||||| | | |||
Sbjct 521179 GGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCG 521238
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| ||||||| ||||| || ||||| |||||
Sbjct 521239 ACTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||||| | | ||| ||||| | || |||||||||||||||||||| ||
Sbjct 521287 ATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCA 521346
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||||||||| ||||| || ||| | || | | ||| || || |||
Sbjct 521347 GAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGA 521406
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||||||||| ||| ||| ||| | | ||| | ||||| | | |||
Sbjct 521407 GGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCG 521466
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| || ||||| ||||| ||||| ||||||||
Sbjct 521467 ACTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| || || || || ||||| ||||| | || ||||| |||||||||||||| ||
Sbjct 520603 ATACCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCA 520662
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| ||||||||| ||||| || ||| |||| | | ||| |||||||||
Sbjct 520663 GAAAGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGA 520722
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| ||| ||| ||| | | |||| ||||| | | ||
Sbjct 520723 GGGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCA 520782
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || ||||||| ||||| || ||||| |||||
Sbjct 520783 ACTTCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|||||||| || || |||||||| ||||| | |||||||| || |||||||| |||||
Sbjct 519919 ATACCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCA 519978
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| ||||| || ||||| || || |||| | | ||| || || |||
Sbjct 519979 GAAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGA 520038
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||||||||| || ||| || || | | ||| | ||||| | | ||
Sbjct 520039 GGAATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCA 520098
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| || || ||||| || ||||||||||||||
Sbjct 520099 ACCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| | ||| | || ||||| | || ||||| || ||||| |||||||||
Sbjct 521515 ATTCCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCG 521574
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| |||||||| || || |||||| |||| | |||||| || || ||
Sbjct 521575 GATAAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGT 521634
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| || || |||||| ||||| | || | |||||| | | |||
Sbjct 521635 GGGATACCTTCCTTATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCA 521694
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || || ||||||| || || || |||||||||||
Sbjct 521695 ACTTCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||||| | | ||| ||||| | || ||||| || ||||| ||||| ||
Sbjct 520831 ATACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCA 520890
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || ||||||||| ||||| ||||| |||| | | || || ||||||
Sbjct 520891 GAAAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGA 520950
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||||||||| ||| ||| ||| | | ||| | ||||| | | ||
Sbjct 520951 GGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCA 521010
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || ||||||| ||||| || ||||| |||||
Sbjct 521011 ACTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|||||||| || || |||||||||||||| | |||||||| || |||||||| |||||
Sbjct 520147 ATACCGCCGCGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCA 520206
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| ||||| || ||||| || || |||| | | ||| || || |||
Sbjct 520207 GAAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGA 520266
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || ||||| ||||| ||| || ||| | | || | ||||| | | ||
Sbjct 520267 GGGATTCCTTCCTTGTCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCA 520326
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || || || | || || || ||||| |||||
Sbjct 520327 ACTTCCAACGTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| ||||| ||||| || || ||| | ||| || ||| || || || || ||
Sbjct 519724 GTAGACTCTTTCTGAATATTATAGTCGGATAAAGTCCGTCCATCCTCTAGCTGCTTGCCC 519783
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
||| | || || | ||||| || ||||||||||||||||| || ||| || |||
Sbjct 519784 GCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTCTTTATCCTGAATTTTCGCTTTC 519843
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | ||| | ||||| | | || || |||| || | ||||| || || |||||
Sbjct 519844 ACGTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTTTTACCAGTGAGAGTC 519903
Query 114366 TTTACAAAAATCTGCAT 114382
|| ||||||||||||||
Sbjct 519904 TTGACAAAAATCTGCAT 519920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420110728446276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |