Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq3174 104 2e-17 >seq3174 Length=2070283 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 |||||||||||||| | ||| ||||| | | ||||| || |||||||| || ||| Sbjct 329116 CCAGTAACATGAGCGATCATGTAAGTCAGCAAAGAATACGACGCTATGTTAAACGGCACT 329057 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 || |||||||||||| | || ||||| ||||| ||| | || |||| | |||| Sbjct 329056 CCTAAACCCATGTCTGCGCTTCTTTGATAAAGCTGCGTGGACAATTCTCCGTTATTTACA 328997 Query 20360 TAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTT 20418 |||||||| ||| || | ||||| ||||| | |||||| || | || |||| || Sbjct 328996 TAAAATTGTACA-AAAACATGACACGGCGGCAATGCCATCTTTGAAATATCAACCGGATT 328938 Query 20419 CCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATT 20464 ||| || |||| || || | ||| || | ||| || |||||| Sbjct 328937 CCAGGCTGACATTATAATACGTCTGTCCTCAGGAGAATGCTTTATT 328892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441347294169320