Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq4435 98.7 8e-16
seq4552 91.5 1e-13
>seq4435
Length=230038
Score = 98.7 bits (108), Expect = 8e-16
Identities = 84/100 (84%), Gaps = 4/100 (4%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 114389
|||||||| |||||||||||||||| ||||||||||||| || | || |||||| |||
Sbjct 18392 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACAATCTAATGAA 18451
Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
||| ||||||| || ||||||||||| ||| || |||||
Sbjct 18452 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 18491
Score = 98.7 bits (108), Expect = 8e-16
Identities = 84/100 (84%), Gaps = 4/100 (4%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TAAGATCTAAGGAA 115586
|||||||| |||||||||||||||| ||||||||||||| || | || |||||| |||
Sbjct 18392 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGGGTACAATCTAATGAA 18451
Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
||| ||||||| || ||||||||||| ||| || |||||
Sbjct 18452 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 18491
>seq4552
Length=86203
Score = 91.5 bits (100), Expect = 1e-13
Identities = 160/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||||| || ||||| ||||||||||| ||| || || ||||| || ||||| |
Sbjct 3558 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 3499
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || | || || | ||| ||||| ||||| ||||| |||||||||||| ||
Sbjct 3498 AGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 3439
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTA---TCAGTAGATTCG 34077
| | |||||||| | | |||| |||| | | | || || || | || ||||
Sbjct 3438 ATTCCCTCTTTGT-CTTGGATTTTGGCTT--TCACATTTTCAATAGTGTCTGAAGCTTCG 3382
Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||||| || || ||||| || || || || ||||||||||| |||||
Sbjct 3381 ACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||||| || ||||| |||| ||||| ||| || || || |||||||| || |
Sbjct 4242 CCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAA 4183
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
| || | || |||| ||| || ||||| || ||||| ||||| |||||| ||
Sbjct 4182 AGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGA 4123
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCAT 34080
| | |||||||||| ||||| ||| | | | | || | || |||| |
Sbjct 4122 ATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACT 4063
Query 34081 TCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
|||| || || ||||| ||||| || |||||||| ||||||||||||
Sbjct 4062 TCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397040028387646
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |