Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4552 152 1e-31 seq3876 145 2e-29 seq4069 136 9e-27 >seq4552 Length=86203 Score = 152 bits (168), Expect = 1e-31 Identities = 173/231 (75%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || ||||||| ||| ||||||||| |||||||| || | Sbjct 3559 TCCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGA 3500 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | || ||||| | |||||| || || || ||||||||||| || ||| || Sbjct 3499 GAGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTG---ATCCGG 3443 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | ||||| ||||| || |||||||| |||||||| ||||| |||| || | ||| Sbjct 3442 GGGAATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTC 3383 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| || || || || |||||||| || || |||||||| Sbjct 3382 GACTTCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 288271 TGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGT 288330 |||| ||| |||||||||||| || ||||||| || || | || ||||| | |||| Sbjct 4218 TGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTCCAGTTGT 4159 Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||||||||||||||||||| ||| ||||| ||||| ||||||||||| Sbjct 4158 TTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGGATTTTA 4099 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || |||||||| || | || | ||| |||||||| || || || || ||||| Sbjct 4098 GCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGGGTAATGGTTTTACCGGTG 4039 Query 288451 AGAGTCTTGACGAATATCTGCATT 288474 ||||| || ||||| || |||||| Sbjct 4038 AGAGTTTTCACGAAGATTTGCATT 4015 Score = 147 bits (162), Expect = 5e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || ||||||| || |||||| ||||| |||||||| | Sbjct 4015 TCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGA 3956 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | |||||||| || ||||| || |||||||||| ||| || || | || Sbjct 3955 GAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGG 3896 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || |||||||| || |||||||| ||||| ||||||||||| | || | ||| || Sbjct 3895 AATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAAC 3836 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| || || ||||| ||||| || ||||| || |||||| Sbjct 3835 TTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3787 Score = 143 bits (158), Expect = 6e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || ||||||| || |||||| ||||| |||||||| | Sbjct 3787 TCCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGA 3728 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || | |||||||| || ||||| || |||||||||| ||| || || | || Sbjct 3727 GAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGG 3668 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || |||||||| || ||||| || ||||| ||||||||||| | || | ||| || Sbjct 3667 AATGCCTTCTTTGTCTTGGATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAAC 3608 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||| || || ||||| ||||| || ||||| || |||||| Sbjct 3607 TTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 3559 Score = 134 bits (148), Expect = 3e-26 Identities = 148/196 (76%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || || | || || | |||||||| | ||| || || ||||| Sbjct 4435 TTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAA 4376 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| | |||||||||| ||||| |||||||||||| ||||| ||||| || ||||| Sbjct 4375 GATTAAACGCTGTTGA---TCTGGAGGGATTCCTTCTTTGTCCTGAATTTTGGCCTTCAC 4319 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 |||||| |||| || | ||| ||||| || ||||| || || || || ||||| || Sbjct 4318 GTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGATGGTTTTACCTGTGAGAGTTTT 4259 Query 288459 GACGAATATCTGCATT 288474 || || || |||||| Sbjct 4258 CACAAAAATTTGCATT 4243 >seq3876 Length=890137 Score = 145 bits (160), Expect = 2e-29 Identities = 176/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 288234 GATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGAT 288293 || ||| |||| ||| || | |||| |||||| || |||| || ||||| || || Sbjct 519681 GAATCAGACATCTCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGACTCTTTCTGAAT 519740 Query 288294 ATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTG 288353 ||||||||||| | || ||||| || |||| || || || ||||| ||||| | || Sbjct 519741 ATTATAGTCGGATAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAAATCAGTCTTTG 519800 Query 288354 TTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC 288413 |||| || || |||||||||||||| |||||||||||||||||||| || | || Sbjct 519801 TTGATCGGGAGGAATGCCTTCTTTATCCTGAATTTTCGCTTTCACGTTTTCGATCGTGTC 519860 Query 288414 GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || ||||| || || || || ||||||||||| || |||||||| Sbjct 519861 CGAAGCCTCAACCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 519920 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || | ||| || || | ||| | ||| ||| || || ||||| || |||| Sbjct 521517 TCCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGA 521576 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || ||||||||||| | || ||||| |||||||||| |||||| ||| ||| Sbjct 521577 TAAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGG 521636 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| ||||| ||||| ||||| || ||||| || || || || | || | ||| || Sbjct 521637 GATACCTTCCTTATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAAC 521696 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || ||||||||||||| ||||| ||||| |||||||| Sbjct 521697 TTCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744 Score = 127 bits (140), Expect = 5e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || | | ||| || | ||| | || ||| || || || ||||| || | Sbjct 520377 TCCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGA 520436 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| |||||||| | |||||||| |||||||||| | ||| || || Sbjct 520437 AAGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGG 520496 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||||||| || ||||| ||||| ||||||||||| || || | || || ||| || Sbjct 520497 GATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCCGACGCTTCGAC 520556 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||| ||||| ||||| || || ||||| || || ||||| Sbjct 520557 TTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCAT 520604 Score = 123 bits (136), Expect = 6e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | || ||||| || ||||| | |||||||| ||||| Sbjct 521097 TTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAA 521156 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | ||| ||| ||||| |||||||||||| || || ||||| ||||| || Sbjct 521157 GATCAATCTCTGCTGA---TCTGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGAC 521213 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | || | || ||||| | |||||| || || ||||||| || || Sbjct 521214 ATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCGGTCAATGTTTT 521273 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 521274 GACGAAAATTTGCAT 521288 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || || | || | ||| | ||| ||| ||||| || || ||||| | Sbjct 520606 CCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAA 520665 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | |||||||| |||||||||| | ||| || ||| Sbjct 520666 AGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 520725 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || ||||| ||||| ||||||||||| || || | || | || ||| Sbjct 520726 ATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACT 520785 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| ||||||| || |||||||| || ||||| Sbjct 520786 TCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832 Score = 120 bits (132), Expect = 7e-22 Identities = 145/196 (74%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | || ||||| || ||||| | |||||||| ||||| Sbjct 521325 TTCTTTTTGAATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAA 521384 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||| ||| ||||| |||||||||||| || || ||||| ||||| || Sbjct 521385 AATCAATCTCTGCTGA---TCTGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGAC 521441 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| || | || | || ||||| | |||||| || || || ||||| || || Sbjct 521442 ATTTTCGATCGTGTCAGATGCCTCGACTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTT 521501 Query 288459 GACGAATATCTGCATT 288474 ||| || ||||||||| Sbjct 521502 GACAAAGATCTGCATT 521517 Score = 116 bits (128), Expect = 9e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || ||||| || | ||||| || |||||||| | |||||||| || || Sbjct 519957 TTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAA 520016 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||| ||| || || ||||||||||| || |||||||| |||||||| Sbjct 520017 GATCAACCTCTGCTGATCGGGAGGAATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTT 520076 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | || | || || || || ||||| || || || || ||||||||||| Sbjct 520077 TTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGAC 520136 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 520137 AAAAATCTGCAT 520148 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| ||||| | || ||||| || ||||| | |||||||| || || Sbjct 520869 TTCCTTCTGAATATTGTAGTCAGAAAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAA 520928 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | || ||| |||||||||||||| || || ||||| ||||| || || Sbjct 520929 GATCAATCTTTGCTGATCCGGAGGGATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATT 520988 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| || | || | || ||||| | |||||| ||||| ||||||| || ||||| Sbjct 520989 TTCGATCGTGTCAGATGCCTCAACTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGAC 521048 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 521049 GAAAATTTGCAT 521060 Score = 111 bits (122), Expect = 4e-19 Identities = 143/196 (73%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || || ||||| || | ||||| || |||||||| | |||||||| || || Sbjct 520185 TTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAA 520244 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | ||| ||| ||||| ||||||||| || || || ||||| ||||| || Sbjct 520245 GATCAACCTCTGCTGA---TCTGGAGGGATTCCTTCCTTGTCTTGAATTTTGGCTTTGAC 520301 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | || || || ||||| | |||||| ||||| || || | ||||| Sbjct 520302 ATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATGGTCTTTCCTGTTAATGTCTT 520361 Query 288459 GACGAATATCTGCATT 288474 |||||| || |||||| Sbjct 520362 GACGAAAATTTGCATT 520377 >seq4069 Length=1127261 Score = 136 bits (150), Expect = 9e-27 Identities = 149/197 (76%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 288284 CTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGA 288343 |||||||||||||||| |||| || |||||||| || || | |||||| || ||||||| Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678 Query 288344 TCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGT 288400 | || |||||||| |||| || ||||| || || |||||||| || || || || | Sbjct 161677 TGAGTCGCTGTTG---ATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACAT 161621 Query 288401 TTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGA 288460 | || || | |||| | ||||| ||||| ||||| || || || || || || || | Sbjct 161620 TCTCGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCA 161561 Query 288461 CGAATATCTGCATTATG 288477 |||| |||||||| ||| Sbjct 161560 CGAAGATCTGCATGATG 161544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179584526489394