Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq3876 111 2e-19
seq4552 107 2e-18
seq4373 102 9e-17
seq4048 96.9 4e-15
seq3872 95.1 1e-14
seq4069 91.5 2e-13
seq3812 91.5 2e-13
seq4322 89.7 6e-13
seq3918 87.8 2e-12
seq3806 87.8 2e-12
>seq3876
Length=890137
Score = 111 bits (122), Expect = 2e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || | |||||| | |||||||||| |||| || |||||||| ||||| ||||
Sbjct 521289 ACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGA 521348
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| || | || || ||||| || || ||||| || | || |||||| || | ||
Sbjct 521349 AAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGG 521408
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | || ||||| ||| |||||| ||||| | | | |||||| | || |
Sbjct 521409 GATTCCTTCTTTGTCT-TGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGA 521467
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
| || | |||||||||||| || || || || || |||||||| ||||||
Sbjct 521468 CTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
|| || | |||||| | ||||||||||| || ||||| ||||| || ||||| |
Sbjct 520378 CCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGAA 520437
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
|| || || |||| || ||||| || || ||||| || | | ||||||||| | ||
Sbjct 520438 AGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGG 520497
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160
| | ||||||||| ||| |||||| ||| | || | | |||||| || ||| ||
Sbjct 520498 ATTCCTTCCTTGTCC-TGAATTTTTGCTTTCACGTTCTCAATCGTGTCCGACGCTTCGAC 520556
Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| | ||||| || || || || ||||| || ||||| ||||||||
Sbjct 520557 TTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCAT 520604
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || | |||||| | |||||||||| |||| || |||||||| ||||| ||||
Sbjct 521061 ACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGA 521120
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
||||| || | || || ||||| || || ||||| || | || |||||| || | ||
Sbjct 521121 AAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGG 521180
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | || ||||| ||| |||||| ||||| | | | |||||| | || |
Sbjct 521181 GATTCCTTCTTTGTCT-TGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGA 521239
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | |||||||||||| || || | || || || || ||||||||
Sbjct 521240 CTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 98.7 bits (108), Expect = 1e-15
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41997 AACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCA 42056
|| ||||||||||||||| ||||||||||| ||||| |||| || || || | ||
Sbjct 520621 AAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCT 520680
Query 42057 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116
|| ||||| || || ||||| || | | ||||||||| | || | | |||||||||
Sbjct 520681 TCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTCC 520740
Query 42117 ATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175
||| |||||| ||| | || | | |||||| | || || || | ||||||||
Sbjct 520741 -TGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGT 520799
Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || || | || || || || ||||||||
Sbjct 520800 CTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 91.5 bits (100), Expect = 2e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040
||| || | |||||| | |||||||||| |||| ||||| ||||||||||| ||||
Sbjct 520833 ACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGA 520892
Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100
|| || || | || || ||||| || ||||| || || | || ||||| || | ||
Sbjct 520893 AAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGG 520952
Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 42159
| | || |||| | ||| |||||| ||||| | | | |||||| | || |
Sbjct 520953 GATTCCTTCTTTGT-CTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAA 521011
Query 42160 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
| || | ||||||||| || || || | || || || || ||||||||
Sbjct 521012 CTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||| | ||| ||||| |||||||||||||| | | || || |||| ||
Sbjct 521536 ACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGATAAGGTACGTCCGTCTTCA 521595
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| |||||||| || | |||||||| |||| ||| | | ||||| || |
Sbjct 521596 AGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGGATACCTTCCTTATCTTGG 521655
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179
|| ||| ||| | || | | ||||| | ||| || || | || ||||| ||
Sbjct 521656 ATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACTTCAAGGGTTATGGTCTTC 521715
Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | ||||| || || || |||||
Sbjct 521716 CCGGTCAATGTCTTCACGAAAATCTGCAT 521744
>seq4552
Length=86203
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||||| | ||||| |||| ||| | |||| || ||||||||||| |||||||
Sbjct 3558 CCTCCTCGAAGACGCAGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAG 3499
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| | | || || || || || ||||| || || || |||||||| || | ||
Sbjct 3498 AGAGTTCTGCCATCTTCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGA 3439
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | ||| ||||| |||||| ||| | | | | ||||| | ||| ||
Sbjct 3438 ATTCCCTCTTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGACT 3379
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| ||||||||||| ||||| || ||||| |||||||| |||||
Sbjct 3378 TCGAGGGTGATGGTTTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041
||||||| | ||||| ||||| || | |||| || ||||| || ||||| || |
Sbjct 4242 CCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAA 4183
Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101
||||| | | || || || || ||||| ||||| || || ||||| || || | |||
Sbjct 4182 AGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGA 4123
Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161
| | ||| |||||| |||||| || | | | | ||||| | ||| ||
Sbjct 4122 ATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACT 4063
Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209
|||| || |||||||| || || || || || || ||||||||||||
Sbjct 4062 TCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCATT 4015
>seq4373
Length=342615
Score = 102 bits (112), Expect = 9e-17
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
|||||| | |||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 241318 AAAAATATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 241377
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 241378 TGACCACTATACTACCGAGGA 241398
>seq4048
Length=968804
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 270424 AAAAAAAATCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 270365
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 270364 TGACCACTATACTACCGAGGA 270344
>seq3872
Length=347470
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 288595 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 288536
Query 57067 TACTACCGAGGA 57078
||||||||||||
Sbjct 288535 TACTACCGAGGA 288524
>seq4069
Length=1127261
Score = 91.5 bits (100), Expect = 2e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 42021 TTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATG 42080
||||| ||||| ||||| | |||||| || | || || || || || || ||||| |||
Sbjct 161735 TTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGATG 161676
Query 42081 AGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC 42140
|||||||| || || | || | | |||||||||| ||| || |||| || |
Sbjct 161675 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 161616
Query 42141 ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAG 42200
| || ||| | || || |||| ||||||||||| ||||| || || || || |||
Sbjct 161615 ATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGAAG 161556
Query 42201 ATTTGCAT 42208
|| |||||
Sbjct 161555 ATCTGCAT 161548
>seq3812
Length=143806
Score = 91.5 bits (100), Expect = 2e-13
Identities = 65/75 (87%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57004 TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 57063
||||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct 40827 TTTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCA 40768
Query 57064 CTATACTACCGAGGA 57078
|||||||| ||||||
Sbjct 40767 CTATACTATCGAGGA 40753
>seq4322
Length=1072510
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 201286 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 201227
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 201226 TATACTATCGAGGA 201213
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||
Sbjct 201603 TTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 201544
Query 57065 TATACTACCGAGGA 57078
||||||| ||||||
Sbjct 201543 TATACTATCGAGGA 201530
>seq3918
Length=5396348
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1569540 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 1569599
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 1569600 ATACTATCGAGGA 1569612
>seq3806
Length=329878
Score = 87.8 bits (96), Expect = 2e-12
Identities = 68/81 (84%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||| || | | |||||||||| ||||||||||||||||||||| ||||
Sbjct 198543 AAAAAAAATCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 198484
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||| ||||||
Sbjct 198483 TAACCACTATACTATCGAGGA 198463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543181409090320
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