Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3876 143 3e-29 seq4552 111 2e-19 >seq3876 Length=890137 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||||||| || || | ||| | || ||||| || ||||| |||||||| | Sbjct 521518 CCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCGGAT 521577 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || |||||||||||||||| || || | || | |||||||| ||||| || Sbjct 521578 AAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTGGG 521637 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || ||||| || ||||| || ||| |||||| ||| | || ||| || || ||| Sbjct 521638 ATACCTTCCTTATCTTGGATCTTTGCTTTTACATTCTCGATGGTGTCAGAAGCTTCAACT 521697 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | |||| |||||| |||||||| || || |||||||| ||||| Sbjct 521698 TCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCAT 521744 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | || | || | ||| | || ||||| |||||||||||||| || | Sbjct 520605 ACCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGA 520664 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | ||||||||||| || ||||| | || | || ||||||||| ||||| Sbjct 520665 AAGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGG 520724 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 |||||||| || || || | |||||||||| || ||| | || ||| || || | Sbjct 520725 GATTCCTTCCTTGTCCTG-AATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAA 520783 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || | |||||| |||||||| ||||| |||||||||||||| Sbjct 520784 CTTCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || || | || || | ||| | || |||||||||||||||||||| || | Sbjct 521061 ACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGA 521120 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||||||||| || ||||| | || | | |||||| || ||||| Sbjct 521121 AAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGG 521180 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||||| ||||| | |||||||||| ||| || | || ||| || || | Sbjct 521181 GATTCCTTCTTTGTCTTG-AATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGA 521239 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || | ||| || |||||||| ||||| |||||||||||||| Sbjct 521240 CTTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||| | || | |||| ||| | || ||||| || |||||||| ||||| | Sbjct 520149 ACCGCCGCGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGA 520208 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || ||||||| ||||| || |||||| | || | || |||||| || ||||| Sbjct 520209 AAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGG 520268 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 |||||||| || ||||| ||||| ||||| ||| ||| | || || || || | Sbjct 520269 GATTCCTTCCTTGTCTTGAATTTTG-GCTTTGACATTCTCGATCGTGTCCGACGCCTCAA 520327 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||| | || | |||||| || || || || || ||||||||||||||| Sbjct 520328 CTTCCAACGTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCATT 520377 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || || | ||| || | ||| | |||||||| || |||||||| ||||||| Sbjct 520378 CCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATCTGAA 520437 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| ||||||||||||| || ||||| | || | || ||||||||| || || Sbjct 520438 AGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGG 520497 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 |||||||| || || || | |||||||||| || ||| | || || || || || Sbjct 520498 ATTCCTTCCTTGTCCTG-AATTTTTGCTTTCACGTTCTCAATCGTGTCCGACGCTTCGAC 520556 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | ||||| ||||| | ||||| || ||||||||||| Sbjct 520557 TTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCAT 520604 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || || | || || | ||| | || ||||| || ||||| ||||| || | Sbjct 520833 ACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGA 520892 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||||||||| || || ||| | || | | ||||| || ||||| Sbjct 520893 AAGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGG 520952 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||||| ||||| | |||||||||| ||| || | || ||| || || | Sbjct 520953 GATTCCTTCTTTGTCTTG-AATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAA 521011 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| | || | |||||| |||||||| ||||| |||||||||||||| Sbjct 521012 CTTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || || | || || | ||| | || |||||||||||||||||||| || | Sbjct 521289 ACCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGA 521348 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||||||||| || ||||| |||| | | |||||| || ||||| Sbjct 521349 AAGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGG 521408 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||||| ||||| | |||||||||| ||| || | || ||| || || | Sbjct 521409 GATTCCTTCTTTGTCTTG-AATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGA 521467 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||| | || | ||| || || |||| ||||| || || || |||||| Sbjct 521468 CTTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCATT 521517 Score = 102 bits (112), Expect = 8e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||| | || | || | ||| | || ||||| || |||||||| ||||| | Sbjct 519921 ACCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGA 519980 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || ||||||| ||||| || |||||| | || | || |||||| |||||||| Sbjct 519981 AAGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGG 520040 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| |||||||| ||||| ||||| Sbjct 520041 AATGCCTTCTTTATCTTGAATTTT 520064 >seq4552 Length=86203 Score = 111 bits (122), Expect = 2e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || |||||||||||||| || ||||| | || || | | ||| Sbjct 3543 AGAACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGCCATCT 3484 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| || ||||| ||| |||| || |||||||| || || |||||||| ||||| ||| Sbjct 3483 TCAAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCT 3424 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| ||| || | || || || || ||||| | || | ||| Sbjct 3423 TGGA-TTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGACTTCGAGGGTGATGGT 3365 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | ||| || || || || ||||| Sbjct 3364 TTTACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | || | |||| || | || ||||||||||| ||||||||||| | Sbjct 4471 ACCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGA 4412 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || | ||||||| || |||||||| || | || | ||||| || || ||||| Sbjct 4411 AAGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGG 4352 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||||| || || ||||| ||| || || | || || || || || Sbjct 4351 GATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGAC 4292 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||| | ||| | ||| || || || | |||||| || |||||||||||| Sbjct 4291 TTCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCATT 4243 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || ||||| || || ||||||||||| | | ||| | | || Sbjct 3315 AGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATCC 3256 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||| || ||| | || | || ||||| || |||||||| |||||||| ||| Sbjct 3255 TCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCT 3196 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | || ||||| || ||| | || ||| || ||||| || | || | ||| Sbjct 3195 TGGA-TCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGT 3137 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | |||||||| || |||||||| Sbjct 3136 TTTCCCAGTGAGGGTTTTTACAAAGATTTGCAT 3104 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||||||||| |||||||| || | | || | | ||||| || || Sbjct 4218 TGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTCCAGTTGT 4159 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| | || || ||||| || || || |||||||| ||||| || || ||||| Sbjct 4158 TTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGGATTTTA 4099 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 |||||| || | || || || || ||||| | || | ||| || ||||| Sbjct 4098 GCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGGGTAATGGTTTTACCGGTG 4039 Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444 | |||||| ||||| ||||||||| Sbjct 4038 AGAGTTTTCACGAAGATTTGCATT 4015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499615926776120