Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31]
4,623 sequences; 267,973,152 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq4552 120 3e-22
seq3876 111 2e-19
>seq4552
Length=86203
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | ||||| ||| || || | | || || ||||| ||||||||||||
Sbjct 4242 CCTCCTCGAAGACGCAGAACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAA 4183
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | || || ||||||||||||| |||| ||||||||||| ||||| ||
Sbjct 4182 AGAGTTCTGCCA-TCTTCCAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGG 4124
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || |||||||| |||||| |||| | ||| | |||||| | | || ||
Sbjct 4123 AATTCCCTCTTTGTCCTGGATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGAC 4064
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||| || | |||||||| || |||||||| || || || |||||
Sbjct 4063 TTCGAGGGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016
Score = 102 bits (112), Expect = 8e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || || | ||||| ||| | ||| | | || ||||| || |||||||| |||
Sbjct 3331 GCCTCCACGAAGACGCAGAACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGA 3272
Query 138447 CATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505
| || | || | ||||| ||||| || || | | |||||| ||| || || || ||||
Sbjct 3271 AAGGGTTCTGCCA-TCCTCTAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAG 3213
Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
| |||||||||||||| ||| || ||| | | || | ||||| | | ||||
Sbjct 3212 GAATACCTTCTTTGTCTTGGATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCA 3153
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|||| | || | ||||| ||||| || ||||||||||| || ||||||
Sbjct 3152 CCTCAAGGGTGATGGTTTTCCCAGTGAGGGTTTTTACAAAGATTTGCATG 3103
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|| |||||||| || | | || || ||||| |||||||| || | ||| | |
Sbjct 4458 CGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCG 4399
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
|| || ||||| || || | |||||| ||||||||| || ||||| || |||||||||
Sbjct 4398 TCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGGATTCCTTCTTTG 4339
Query 138520 TCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578
|| ||| |||| | || | | ||| | ||||| | | || || || | || |
Sbjct 4338 TC-CTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACTTCAAGAGTGAT 4280
Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||||| || |||||||| |||||||| |||||
Sbjct 4279 GGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||| | ||||| ||| | ||| | | || || || || ||||| ||||| |
Sbjct 4014 CCTCCTCGAAGACGCAGAACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTC--TG 3957
Query 138448 ATAGTACGCGA--GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505
| ||| | | ||| || | |||||||| | |||| | ||| || ||||| ||||
Sbjct 3956 AGAGTGTCCTACCGTCTTCCAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAG 3897
Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565
| || ||||||||||| |||||| ||||| | ||| | ||||| | | || |
Sbjct 3896 GAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAA 3837
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | |||||||| || |||||||| || || || |||||
Sbjct 3836 CTTCAAGAGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788
>seq3876
Length=890137
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| || | | |||||| ||||| | | | || ||||| |||||||| || ||
Sbjct 519922 CCGCCGCGAAGCCTCAAAACCAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 519981
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| ||| ||||| ||||| |||| | |||| | | ||| || || |||||
Sbjct 519982 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCGGGAGGA 520041
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCAC 138566
|| |||||||| || ||| |||| | || | | ||| | ||||| | | ||| ||
Sbjct 520042 ATGCCTTCTTTATCT-TGAATTTTCGCCTTCACGTTTTCGATCGTGTCCGAAGCCTCAAC 520100
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | ||||||||||| ||||| || ||||||||||||||
Sbjct 520101 CTCCAGTGTGATAGTTTTACCAGTGAGAGTCTTGACAAAAATCTGCAT 520148
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || ||||| | ||| ||||| | | || || |||||||||||||||||
Sbjct 521290 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521349
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || || || || ||||| |||| | || | | ||| || || |||||
Sbjct 521350 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATCAATCTCTGCTGATCTGGAGGG 521409
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||||||||| ||| |||||| ||| | | ||| | ||||| | | ||| ||
Sbjct 521410 ATTCCTTCTTTGTC-TTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGAC 521468
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | ||||| || ||||| ||||| ||||| ||||||||
Sbjct 521469 TTCCAACGTGATGGTTTTTCCTGTCAGGGTTTTGACAAAGATCTGCAT 521516
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || ||||| | ||| ||||| | | || || |||||||||||||||||
Sbjct 521062 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521121
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || || || || ||||| |||| |||| | | ||| || || |||||
Sbjct 521122 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGG 521181
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||||||||| ||| |||||| ||| | | ||| | ||||| | | ||| ||
Sbjct 521182 ATTCCTTCTTTGTC-TTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGAC 521240
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | ||||| || |||| ||||| || ||||| |||||
Sbjct 521241 TTCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521288
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| || | | |||||||||||| | | | || ||||| |||||||| || ||
Sbjct 520150 CCGCCGCGAAGCCTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAA 520209
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| ||| ||||| ||||| |||| | |||| | | ||| || || |||||
Sbjct 520210 AGCGTACGGCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGG 520269
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| |||| | ||| | | || | ||||| | || ||| ||
Sbjct 520270 ATTCCTTCCTTGTC-TTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAAC 520328
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | || || || || | || || || ||||| |||||
Sbjct 520329 TTCCAACGTGATGGTCTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462
||||| ||||| | | || |||||||||||||||||||| | ||||| ||
Sbjct 520621 AAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTACGGCCATCT 520680
Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522
|| || ||||| |||| |||| | | ||| ||||||||||| || ||||| |||||
Sbjct 520681 TCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGGATTCCTTCCTTGTC- 520739
Query 138523 GTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT 138581
||| |||||| ||| | | || | ||||| | | ||| || || | || | ||
Sbjct 520740 CTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACTTCCAATGTGATGGT 520799
Query 138582 TTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| || |||| ||||| || ||||| |||||
Sbjct 520800 CTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 520832
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| || ||||| || |||||| | ||| || ||||| || || || || |
Sbjct 519727 GACTCTTTCTGAATATTATAGTCGGATAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCG 519786
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || || | ||||| || ||||| || |||||||| || ||| |||| | ||| |
Sbjct 519787 AAAATCAGTCTTTGTTGATCGGGAGGAATGCCTTCTTTATCC-TGAATTTTCGCTTTCAC 519845
Query 138541 -TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
| ||| | ||||| | | ||| ||||| | || | ||||||||||| ||||| ||
Sbjct 519846 GTTTTCGATCGTGTCCGAAGCCTCAACCTCCAGTGTGATAGTTTTACCAGTGAGAGTCTT 519905
Query 138600 TACAAAAATCTGCAT 138614
||||||||||||||
Sbjct 519906 GACAAAAATCTGCAT 519920
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || ||||| | ||| ||||| | | || ||||| ||||| ||||||||
Sbjct 520834 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCCTTCTGAATATTGTAGTCAGAA 520893
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || || || ||||| || | | |||| | | || || ||||||||
Sbjct 520894 AGTGTGCGGCCATCTTCAAGCTGTTTTCCAGCAAAGATCAATCTTTGCTGATCCGGAGGG 520953
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||||||||| ||| |||||| ||| | | ||| | ||||| | | ||| ||
Sbjct 520954 ATTCCTTCTTTGTC-TTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCAAC 521012
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | || || || |||| ||||| || ||||| |||||
Sbjct 521013 TTCCAACGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCAT 521060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496233722236560
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