Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachymyrmex_20zeteki_20[refseq_20GCF_5F001594055.1_202016-03-31] 4,623 sequences; 267,973,152 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq4552 167 2e-36 seq3876 107 1e-18 seq4069 86.0 4e-12 >seq4552 Length=86203 Score = 167 bits (184), Expect = 2e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || || | || ||||||||| || || ||||| |||||||| ||||||||||| Sbjct 4470 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCTTTTTGGATGTTGTAATCAGAA 4411 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| |||| ||||||| | ||| ||||||||| | || ||||||||||| || || Sbjct 4410 AGAGTTCTGCCGTCTTCCAGTTGCTTGCCAGCGAAGATTAAACGCTGTTGATCTGGAGGG 4351 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| ||||| ||||||| || || |||| ||||| || | ||| || Sbjct 4350 ATTCCTTCTTTGTCCTGAATTTTGGCCTTCACGTTTTCAATAGTGTCTGAAGCTTCGACT 4291 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || |||||||||||||| |||||||| |||||||||||||| Sbjct 4290 TCAAGAGTGATGGTTTTACCTGTGAGAGTTTTCACAAAAATTTGCAT 4244 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || ||||| || || |||||||| |||||||| ||| ||| |||| | ||||| Sbjct 4225 AACCAAGTGAAGTGTGGATTCTTTTTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTC 4166 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | |||||| || ||| | |||| ||||||||| || ||||||||| || ||||| Sbjct 4165 CAGTTGTTTACCGGCGAAGATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTG 4106 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||| ||||| |||| || || || | ||| || || | |||||||||||| Sbjct 4105 GATTTTAGCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGGGTAATGGTTTT 4046 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || |||||||| || || |||||||| Sbjct 4045 ACCGGTGAGAGTTTTCACGAAGATTTGCAT 4016 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| || || |||||||| || || ||||| |||| |||| | ||||| Sbjct 3541 AACCAGATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAGAGAGTTCTGCCATCTTC 3482 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | |||||||||||| | |||| |||||| || || |||||||| || ||||| Sbjct 3481 AAGTTGTTTGCCAGCAAAAATCAGACGCTGCTGATCCGGGGGAATTCCCTCTTTGTCTTG 3422 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| ||| ||| |||| ||||| || | ||| || || | ||| |||||||| Sbjct 3421 GATTTTGGCTTTCACATTTTCAATAGTGTCTGAAGCTTCGACTTCGAGGGTGATGGTTTT 3362 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || ||||| || ||||| || ||||| Sbjct 3361 ACCCGTAAGAGTCTTCACAAAGATCTGCAT 3332 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| ||||| ||||| || ||||| || || ||| | || ||||||| Sbjct 3769 AACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTCCTACCGTCTTC 3710 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || ||||| |||||| | |||||||| || ||||| ||||| ||||| ||||| Sbjct 3709 CAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTG 3650 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || || |||||| ||||||| || || ||| || || | ||| |||||||| Sbjct 3649 GATCTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGGGTGATGGTTTT 3590 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || |||||||| || || |||||||| Sbjct 3589 ACCGGTGAGAGTTTTCACGAAGATTTGCAT 3560 Score = 122 bits (134), Expect = 6e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| ||||| ||||| || ||||| || || ||| | || ||||||| Sbjct 3997 AACCAGATGAAGAGTAGATTCTTTCTGGATGTTATAGTCTGAGAGTGTCCTACCGTCTTC 3938 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || ||||| |||||| | |||||||| || ||||| ||||| ||||| ||||| Sbjct 3937 CAACTGTTTACCAGCGAAGATCAAACGTTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTG 3878 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||| |||||| ||||||| || || ||| || || | || |||||||| Sbjct 3877 GATTTTAGCTTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGAGTGATGGTTTT 3818 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || |||||||| || || |||||||| Sbjct 3817 ACCGGTGAGAGTTTTCACGAAGATTTGCAT 3788 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | |||||| ||||| || || || |||||||||||| || |||| | || || Sbjct 3313 AACAAGATGAAGTGTAGATTCCTTCTGGATGTTGTAATCGGAAAGGGTTCTGCCATCCTC 3254 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || ||| || ||||| | || ||||| || || || ||||| ||||| ||||| Sbjct 3253 TAGTTGCTTTCCAGCAAAGATTAAACGTTGCTGATCTGGAGGAATACCTTCTTTGTCTTG 3194 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || || ||| || | |||||||| || | ||| || || | ||| |||||||| Sbjct 3193 GATCTTAGCTTTGACGTTCTCTATAGTGTCAGAAGCTTCCACCTCAAGGGTGATGGTTTT 3134 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||||||||| |||||||| Sbjct 3133 CCCAGTGAGGGTTTTTACAAAGATTTGCAT 3104 >seq3876 Length=890137 Score = 107 bits (118), Expect = 1e-18 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||||||| | || ||||| || || || || || || || ||||||||| | Sbjct 521518 CCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTCTGAATATTGTAATCG--G 521575 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | || || ||||||| | || || |||||| | ||||||||||| || ||| || Sbjct 521576 ATAAGGTACGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGCTGCTGATCGGGTG 521635 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 | || |||||||| || || ||||| ||||||| | || || || || | ||| Sbjct 521636 GGATACCTTCCTTATCTTGGATCTTTGC-TTTTACATTCTCGATGGTGTCAGAAGCTTCA 521694 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || | ||| ||||| || || |||| || || || ||||| |||||| Sbjct 521695 ACTTCAAGGGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCATA 521745 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || || | | ||| ||||| || || || |||||||| |||||||| || Sbjct 521062 CCACCACGTAAACGGAGAACCAAATGCAGTGTGGATTCTTTTTGAATGTTGTAGTCAGAA 521121 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||| | ||||| || ||| | ||||| | ||| || || || Sbjct 521122 AGAGTGCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGG 521181 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| ||||| |||||| ||| ||| |||| || || || || || Sbjct 521182 ATTCCTTCTTTGTCTTGAATTTTTGCTTTGACATTTTCGATCGTGTCAGATGCCTCGACT 521241 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || |||||||| || |||| ||||| || |||||||||||| Sbjct 521242 TCCAACGTGATGGTTTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 521289 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 14962 CTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCG 15021 || ||||||||||| |||||||| || || || ||||| ||||| || | | || Sbjct 520162 CTCAAAACTAAATGCAGGGTAGATTCCTTCTGAATGTTATAATCAGAAAGCGTACGGCCG 520221 Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| | ||||| || || | ||||| | ||| || || || |||||||||||| Sbjct 520222 TCTTCGAGCTGTTTTCCGGCAAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTG 520281 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || ||||||| ||| ||| | || || || || || || || || || ||| Sbjct 520282 TCTTGAATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCCTCAACTTCCAACGTGATG 520341 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| | || || || ||||||||||| Sbjct 520342 GTCTTTCCTGTTAATGTCTTGACGAAAATTTGCAT 520376 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | |||||||| ||||| | || || || ||||| |||||||| || Sbjct 520606 CCACCGCGAAGCCTTAAAACCAAATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGAA 520665 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | ||||| || ||| | ||||| | ||| ||||| || Sbjct 520666 AGGGTACGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGAGGG 520725 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| |||||| ||| || | || || || || || || Sbjct 520726 ATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCAGATGCCTCAACT 520785 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || |||| ||||| || |||||||||||| Sbjct 520786 TCCAATGTGATGGTCTTTCCGGTCAATGTTTTGACGAAAATTTGCATA 520833 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || || | | ||| ||||| | || || || || || ||||| ||||| || Sbjct 520378 CCACCACGTAAACGAAGAACCAAATGCAAAGTCGATTCCTTCTGAATGTTATAATC--TG 520435 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || ||||||| | ||||| || ||| | ||||| | ||| ||||| | Sbjct 520436 AAAGTGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGG 520495 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | |||||||||||||| |||||| ||| || | || || || || ||| | Sbjct 520496 GGATTCCTTCCTTGTCCTGAATTTTTGCTTTCACGTTCTCAATCGTGTCCGACGCTTCGA 520555 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || | || || || ||||| || || ||||| ||||||||||||||| Sbjct 520556 CTTCCAGAGTGATTGTCTTACCGGTGAGCGTTTTGACAAAAATTTGCATA 520605 >seq4069 Length=1127261 Score = 86.0 bits (94), Expect = 4e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 14987 CTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15046 ||||||| || || |||||| ||| | | | || || | ||||||||| ||| | | Sbjct 161737 CTTTTTGGATATTATAATCGGACAGAGTGCGTCCATCCTCCAGTTGTTTGCCGGCGAAGA 161678 Query 15047 TCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTT 15106 | | |||||||| || |||||||| |||||||| || ||| || ||| | | Sbjct 161677 TGAGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 161618 Query 15107 CTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15166 | || |||||| ||||| || | ||| ||||||||||| || || ||||| || | Sbjct 161617 CGATGGTATCGGAGGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 161558 Query 15167 AAATTTGCAT 15176 | || ||||| Sbjct 161557 AGATCTGCAT 161548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357371863529555